15 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBC	Polyubiquitin-C isoform A. (365 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	REL	Proto-oncogene c-Rel. (573 aa)
	DUSP4	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (256 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit isoform B. (1044 aa)
	JUN	Transcription factor AP-1; Belongs to the bZIP family. (314 aa)
	CHUK	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (1038 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (313 aa)
	AV530_003980	Transcription factor RelB-like protein. (109 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)
	LY96	Lymphocyte antigen 96 isoform B. (136 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (276 aa)
	MAP2K2	Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily. (398 aa)
	UBA52	Ubiquitin-60S ribosomal protein L40. (128 aa)
	MAPK9	Mitogen-activated protein kinase. (424 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_003980	CHUK	A0A1V4KFQ4	A0A1V4K9U3	Transcription factor RelB-like protein.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.935
AV530_003980	JUN	A0A1V4KFQ4	A0A1V4JXT2	Transcription factor RelB-like protein.	Transcription factor AP-1; Belongs to the bZIP family.	0.441
AV530_003980	MAPK9	A0A1V4KFQ4	A0A1V4KUP0	Transcription factor RelB-like protein.	Mitogen-activated protein kinase.	0.838
AV530_003980	MYD88	A0A1V4KFQ4	A0A1V4KLH0	Transcription factor RelB-like protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.790
AV530_003980	NFKB1	A0A1V4KFQ4	A0A1V4JU18	Transcription factor RelB-like protein.	Nuclear factor NF-kappa-B p105 subunit isoform B.	0.944
AV530_003980	NFKBIA	A0A1V4KFQ4	A0A1V4KFI8	Transcription factor RelB-like protein.	NF-kappa-B inhibitor alpha.	0.974
AV530_003980	RPS27A	A0A1V4KFQ4	A0A1V4IG00	Transcription factor RelB-like protein.	Ubiquitin-40S ribosomal protein S27a.	0.741
AV530_003980	TRAF6	A0A1V4KFQ4	A0A1V4KG42	Transcription factor RelB-like protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.603
AV530_003980	UBC	A0A1V4KFQ4	A0A1V4K2F8	Transcription factor RelB-like protein.	Polyubiquitin-C isoform A.	0.699
CHUK	AV530_003980	A0A1V4K9U3	A0A1V4KFQ4	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Transcription factor RelB-like protein.	0.935
CHUK	JUN	A0A1V4K9U3	A0A1V4JXT2	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Transcription factor AP-1; Belongs to the bZIP family.	0.444
CHUK	LY96	A0A1V4K9U3	A0A1V4KGK9	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Lymphocyte antigen 96 isoform B.	0.591
CHUK	MAP2K2	A0A1V4K9U3	A0A1V4KQ20	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily.	0.561
CHUK	MYD88	A0A1V4K9U3	A0A1V4KLH0	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.724
CHUK	NFKB1	A0A1V4K9U3	A0A1V4JU18	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Nuclear factor NF-kappa-B p105 subunit isoform B.	0.944
CHUK	NFKBIA	A0A1V4K9U3	A0A1V4KFI8	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	NF-kappa-B inhibitor alpha.	0.996
CHUK	REL	A0A1V4K9U3	A0A1V4IGB8	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Proto-oncogene c-Rel.	0.935
CHUK	RPS27A	A0A1V4K9U3	A0A1V4IG00	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Ubiquitin-40S ribosomal protein S27a.	0.725
CHUK	TRAF6	A0A1V4K9U3	A0A1V4KG42	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.945
CHUK	UBA52	A0A1V4K9U3	A0A1V4KQG5	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Ubiquitin-60S ribosomal protein L40.	0.729