40 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAD23B	UV excision repair RAD23-like protein B. (400 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	CUL4A	Cullin-4A; Belongs to the cullin family. (770 aa)
	SPATS2	Spermatogenesis-associated serine-rich protein 2. (799 aa)
	NFRKB	Nuclear factor related to kappa-B-binding protein isoform A. (1408 aa)
	INO80C	INO80 complex subunit C. (185 aa)
	RPAP3	RNA polymerase II-associated protein 3. (718 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (108 aa)
	COPS7A	COP9 signalosome complex subunit 7a. (266 aa)
	COPS2	COP9 signalosome complex subunit 2 isoform B. (450 aa)
	XPC	DNA repair protein complementing XP-C cells. (959 aa)
	RUVBL1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	PARP1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
	DDB1	DNA damage-binding protein 1. (1140 aa)
	CETN3	Centrin-3. (167 aa)
	COPS4	COP9 signalosome complex subunit 4. (406 aa)
	AV530_009474	Uncharacterized protein. (74 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	VWA5B2	Von Willebrand factor A domain-containing protein 5B2. (1106 aa)
	GPS1	COP9 signalosome complex subunit 1. (471 aa)
	COPS8	COP9 signalosome complex subunit 8. (207 aa)
	PARP3	Poly [ADP-ribose] polymerase. (180 aa)
	ACTR8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
	YY1	Transcriptional repressor protein YY1. (269 aa)
	YY1-2	Transcriptional repressor protein YY1. (226 aa)
	INO80	DNA helicase INO80. (1471 aa)
	DDB2	DNA damage-binding protein 2 isoform B. (516 aa)
	AV530_013625	MitMem_reg domain-containing protein. (103 aa)
	COPS5	COP9 signalosome complex subunit 5 isoform B. (342 aa)
	ACTR5	Actin-related protein 5; Belongs to the actin family. (607 aa)
	COPS7B	COP9 signalosome complex subunit 7b. (259 aa)
	AV530_018941	Uncharacterized protein. (216 aa)
	KXD1	KxDL motif-containing protein 1. (190 aa)
	AV530_009546	PAPA-1 domain-containing protein. (380 aa)
	COPS3	COP9 signalosome complex subunit 3. (423 aa)
	AV530_016344	Von Willebrand factor A domain-containing protein 5A-like. (757 aa)
	AV530_003886	Cullin domain-containing protein; Belongs to the cullin family. (200 aa)
	AV530_003887	CULLIN_2 domain-containing protein; Belongs to the cullin family. (614 aa)
	AV530_017627	UBA domain-containing protein. (117 aa)
	INO80D	INO80 complex subunit D. (1030 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTR5	ACTR8	A0A1V4KL08	A0A1V4K8W1	Actin-related protein 5; Belongs to the actin family.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.995
ACTR5	AV530_009474	A0A1V4KL08	A0A1V4JZC6	Actin-related protein 5; Belongs to the actin family.	Uncharacterized protein.	0.849
ACTR5	AV530_009546	A0A1V4KL08	A0A1V4KRY2	Actin-related protein 5; Belongs to the actin family.	PAPA-1 domain-containing protein.	0.955
ACTR5	AV530_013625	A0A1V4KL08	A0A1V4KFN0	Actin-related protein 5; Belongs to the actin family.	MitMem_reg domain-containing protein.	0.606
ACTR5	AV530_017627	A0A1V4KL08	A0A1V4L005	Actin-related protein 5; Belongs to the actin family.	UBA domain-containing protein.	0.611
ACTR5	AV530_018941	A0A1V4KL08	A0A1V4KPV2	Actin-related protein 5; Belongs to the actin family.	Uncharacterized protein.	0.955
ACTR5	COPS5	A0A1V4KL08	A0A1V4KGC6	Actin-related protein 5; Belongs to the actin family.	COP9 signalosome complex subunit 5 isoform B.	0.649
ACTR5	DDB1	A0A1V4KL08	A0A1V4JQX0	Actin-related protein 5; Belongs to the actin family.	DNA damage-binding protein 1.	0.683
ACTR5	INO80	A0A1V4KL08	A0A1V4KES6	Actin-related protein 5; Belongs to the actin family.	DNA helicase INO80.	0.986
ACTR5	INO80C	A0A1V4KL08	A0A1V4J8I5	Actin-related protein 5; Belongs to the actin family.	INO80 complex subunit C.	0.998
ACTR5	INO80D	A0A1V4KL08	A0A1V4L124	Actin-related protein 5; Belongs to the actin family.	INO80 complex subunit D.	0.915
ACTR5	NFRKB	A0A1V4KL08	A0A1V4J7H4	Actin-related protein 5; Belongs to the actin family.	Nuclear factor related to kappa-B-binding protein isoform A.	0.997
ACTR5	RAD23B	A0A1V4KL08	A0A1V4IPS0	Actin-related protein 5; Belongs to the actin family.	UV excision repair RAD23-like protein B.	0.611
ACTR5	RPAP3	A0A1V4KL08	A0A1V4JAI0	Actin-related protein 5; Belongs to the actin family.	RNA polymerase II-associated protein 3.	0.953
ACTR5	RPS27A	A0A1V4KL08	A0A1V4IG00	Actin-related protein 5; Belongs to the actin family.	Ubiquitin-40S ribosomal protein S27a.	0.419
ACTR5	RUVBL1	A0A1V4KL08	A0A1V4JJ08	Actin-related protein 5; Belongs to the actin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.998
ACTR5	SPATS2	A0A1V4KL08	A0A1V4J519	Actin-related protein 5; Belongs to the actin family.	Spermatogenesis-associated serine-rich protein 2.	0.942
ACTR5	UBC	A0A1V4KL08	A0A1V4K2F8	Actin-related protein 5; Belongs to the actin family.	Polyubiquitin-C isoform A.	0.419
ACTR5	YY1	A0A1V4KL08	A0A1V4KAP0	Actin-related protein 5; Belongs to the actin family.	Transcriptional repressor protein YY1.	0.838
ACTR5	YY1-2	A0A1V4KL08	A0A1V4KC75	Actin-related protein 5; Belongs to the actin family.	Transcriptional repressor protein YY1.	0.838