STRINGSTRING
POLR2H POLR2H ISY1 ISY1 POLR2J POLR2J UBC UBC COQ9 COQ9 TCEANC2 TCEANC2 ERCC2 ERCC2 COPS4 COPS4 CCNH CCNH POLR2B POLR2B GTF2H3 GTF2H3 DDB1 DDB1 PRPF19 PRPF19 CDK7 CDK7 AV530_008697 AV530_008697 AV530_017641 AV530_017641 GTF2H4 GTF2H4 AV530_003887 AV530_003887 AV530_003886 AV530_003886 USP7 USP7 COPS3 COPS3 ERCC8 ERCC8 KXD1 KXD1 POLR2E POLR2E COPS7B COPS7B ERCC6 ERCC6 TCEA2 TCEA2 POLR2K POLR2K PPP1R42 PPP1R42 COPS5 COPS5 TCEA1 TCEA1 AV530_013625 AV530_013625 AV530_013971 AV530_013971 XPA XPA HMGN1 HMGN1 CUL4A CUL4A RPS27A RPS27A AV530_004421 AV530_004421 AQR AQR NAIP NAIP ZNF830 ZNF830 POLR2F POLR2F EP300 EP300 RBX1 RBX1 COPS7A COPS7A TCEA3 TCEA3 TCEANC TCEANC AV530_017169 AV530_017169 UVSSA UVSSA NRDE2 NRDE2 COPS2 COPS2 PPIE PPIE GTF2H5 GTF2H5 POLR2L POLR2L GTF2H1 GTF2H1 MNAT1 MNAT1 AV530_014737 AV530_014737 COPS8 COPS8 ERCC3 ERCC3 POLR2D POLR2D GPS1 GPS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ISY1Pre-mRNA-splicing factor ISY1-like protein. (310 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
COQ9Ubiquinone biosynthesis protein COQ9, mitochondrial. (634 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain-containing protein 2. (177 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (198 aa)
COPS4COP9 signalosome complex subunit 4. (406 aa)
CCNHCyclin-H; Belongs to the cyclin family. (321 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
GTF2H3General transcription factor IIH subunit 3. (307 aa)
DDB1DNA damage-binding protein 1. (1140 aa)
PRPF19Pre-mRNA-processing factor 19. (504 aa)
CDK7Cyclin-dependent kinase 7. (226 aa)
AV530_008697Protein kinase domain-containing protein. (86 aa)
AV530_017641HELICc2 domain-containing protein. (68 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (320 aa)
AV530_003887CULLIN_2 domain-containing protein; Belongs to the cullin family. (614 aa)
AV530_003886Cullin domain-containing protein; Belongs to the cullin family. (200 aa)
USP7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1103 aa)
COPS3COP9 signalosome complex subunit 3. (423 aa)
ERCC8DNA excision repair protein ERCC-8 isoform B. (434 aa)
KXD1KxDL motif-containing protein 1. (190 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
COPS7BCOP9 signalosome complex subunit 7b. (259 aa)
ERCC6DNA excision repair protein ERCC-6. (1554 aa)
TCEA2Transcription elongation factor A protein 2. (325 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (128 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42. (334 aa)
COPS5COP9 signalosome complex subunit 5 isoform B. (342 aa)
TCEA1Transcription elongation factor A protein 1 isoform B. (304 aa)
AV530_013625MitMem_reg domain-containing protein. (103 aa)
AV530_013971RNA_pol_Rpb1_7 domain-containing protein. (101 aa)
XPADNA repair protein complementing XP-A cells. (180 aa)
HMGN1Non-histone chromosomal protein HMG-14. (102 aa)
CUL4ACullin-4A; Belongs to the cullin family. (770 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
AV530_004421Uncharacterized protein. (606 aa)
AQRIntron-binding protein aquarius. (1467 aa)
NAIPBaculoviral IAP repeat-containing protein 1. (1198 aa)
ZNF830Zinc finger protein 830. (362 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
EP300Histone acetyltransferase p300. (1778 aa)
RBX1E3 ubiquitin-protein ligase RBX1. (108 aa)
COPS7ACOP9 signalosome complex subunit 7a. (266 aa)
TCEA3Transcription elongation factor A protein 3. (413 aa)
TCEANCTranscription elongation factor A N-terminal and central domain-containing protein. (360 aa)
AV530_017169Uncharacterized protein. (338 aa)
UVSSAUV-stimulated scaffold protein A isoform A. (429 aa)
NRDE2NRDE2-like protein. (1170 aa)
COPS2COP9 signalosome complex subunit 2 isoform B. (450 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
GTF2H5General transcription factor IIH subunit 5. (103 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
GTF2H1General transcription factor IIH subunit 1. (581 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
AV530_014737HELICc2 domain-containing protein. (147 aa)
COPS8COP9 signalosome complex subunit 8. (207 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (780 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
GPS1COP9 signalosome complex subunit 1. (471 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.