STRINGSTRING
WDR31 WDR31 TRAF1 TRAF1 OPTN OPTN CYLD CYLD ULK2 ULK2 UBC UBC AV530_008839 AV530_008839 AV530_008840 AV530_008840 TNFSF10 TNFSF10 TMEM198 TMEM198 UBE2D1-2 UBE2D1-2 AV530_002466 AV530_002466 AV530_002465 AV530_002465 AV530_017096 AV530_017096 USP4 USP4 OTUD1 OTUD1 TAX1BP1 TAX1BP1 NSMAF NSMAF BAG4 BAG4 BIRC7 BIRC7 CFLAR CFLAR UBE2D3 UBE2D3 ULK1 ULK1 UBE2L3 UBE2L3 FADD FADD TNFAIP3 TNFAIP3 SPATA2 SPATA2 AV530_009221 AV530_009221 TRAF2 TRAF2 AV530_008733 AV530_008733 AV530_016422 AV530_016422 KXD1 KXD1 AV530_008875 AV530_008875 STUB1 STUB1 UBE2D2 UBE2D2 MAPKAPK2 MAPKAPK2 SMPD2 SMPD2 XIAP XIAP AV530_017808 AV530_017808 AV530_011480 AV530_011480 CASP3 CASP3 SPPL2A SPPL2A AV530_012453 AV530_012453 CLIP4 CLIP4 TBK1 TBK1 BIRC2 BIRC2 USP2 USP2 AV530_002751 AV530_002751 AV530_002749 AV530_002749 AV530_002750 AV530_002750 AV530_011069 AV530_011069 RPS27A RPS27A FAM105A FAM105A AV530_004017 AV530_004017 SMPD3 SMPD3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR31WD repeat-containing protein 31. (340 aa)
TRAF1TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (558 aa)
OPTNOptineurin isoform B. (603 aa)
CYLDUbiquitin carboxyl-terminal hydrolase CYLD isoform B; Belongs to the peptidase C19 family. (954 aa)
ULK2Serine/threonine-protein kinase ULK2. (1077 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
AV530_008839WD_REPEATS_REGION domain-containing protein. (134 aa)
AV530_008840Guanine nucleotide-binding protein subunit beta-2-like 1. (268 aa)
TNFSF10Tumor necrosis factor ligand superfamily member 10 isoform B; Belongs to the tumor necrosis factor family. (295 aa)
TMEM198Transmembrane protein 198. (364 aa)
UBE2D1-2Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
AV530_002466SAM domain-containing protein. (436 aa)
AV530_002465Mitogen-activated protein kinase kinase kinase MLT. (450 aa)
AV530_017096ANK_REP_REGION domain-containing protein. (115 aa)
USP4Ubiquitin carboxyl-terminal hydrolase. (942 aa)
OTUD1OTU domain-containing protein 1. (350 aa)
TAX1BP1Tax1-binding protein 1 isoform A. (780 aa)
NSMAFProtein FAN isoform B. (918 aa)
BAG4BAG family molecular chaperone regulator 4. (321 aa)
BIRC7Baculoviral IAP repeat-containing protein 7. (311 aa)
CFLARCASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family. (443 aa)
UBE2D3Ubiquitin-conjugating enzyme E2 D3 isoform B; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
ULK1Serine/threonine-protein kinase ULK1 isoform B. (1049 aa)
UBE2L3Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
FADDFAS-associated death domain protein. (139 aa)
TNFAIP3Tumor necrosis factor alpha-induced protein 3. (840 aa)
SPATA2Spermatogenesis-associated protein 2. (523 aa)
AV530_009221OTU domain-containing protein. (134 aa)
TRAF2TNF receptor-associated factor. (472 aa)
AV530_008733RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (363 aa)
AV530_016422IBR domain-containing protein. (170 aa)
KXD1KxDL motif-containing protein 1. (190 aa)
AV530_008875Ubiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family. (749 aa)
STUB1E3 ubiquitin-protein ligase CHIP. (313 aa)
UBE2D2Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (291 aa)
MAPKAPK2MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily. (383 aa)
SMPD2Sphingomyelin phosphodiesterase 2. (410 aa)
XIAPE3 ubiquitin-protein ligase XIAP isoform A. (574 aa)
AV530_017808Ubiquitin carboxyl-terminal hydrolase. (587 aa)
AV530_011480Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (249 aa)
CASP3Caspase-3; Belongs to the peptidase C14A family. (334 aa)
SPPL2ASignal peptide peptidase-like 2A isoform B. (534 aa)
AV530_012453Tumor necrosis factor receptor superfamily member 1A. (428 aa)
CLIP4CAP-Gly domain-containing linker protein 4. (132 aa)
TBK1Serine/threonine-protein kinase TBK1. (729 aa)
BIRC2Baculoviral IAP repeat-containing protein 2 isoform A. (608 aa)
USP2Ubiquitin carboxyl-terminal hydrolase. (589 aa)
AV530_002751PA domain-containing protein. (264 aa)
AV530_002749Uncharacterized protein. (135 aa)
AV530_002750Uncharacterized protein. (213 aa)
AV530_011069DUF4203 domain-containing protein. (258 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
FAM105AInactive ubiquitin thioesterase FAM105A. (370 aa)
AV530_004017Caspase-8; Belongs to the peptidase C14A family. (490 aa)
SMPD3Sphingomyelin phosphodiesterase 3. (662 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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