39 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BCL10	B-cell lymphoma/leukemia 10. (242 aa)
	UBE2N	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	PEX10	Peroxisome biogenesis factor 10. (325 aa)
	PEX14	Peroxisomal membrane protein PEX14. (378 aa)
	KXD1	KxDL motif-containing protein 1. (190 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
	UBE2D2	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (291 aa)
	YIPF5	Protein YIPF. (278 aa)
	AV530_016124	E3 ubiquitin protein ligase. (98 aa)
	AV530_003924	Ras-related GTP-binding protein A. (313 aa)
	PEX13	Peroxisome biogenesis factor 13. (340 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	AV530_013083	Histone H2B; Belongs to the histone H2B family. (126 aa)
	RNF20	E3 ubiquitin protein ligase. (936 aa)
	PEX5	Peroxisomal biogenesis factor 5 isoform A. (645 aa)
	WDR61	WD repeat-containing protein 61. (305 aa)
	VIMP	Selenoprotein S. (119 aa)
	TMEM129	E3 ubiquitin-protein ligase TM129. (362 aa)
	YIPF7	Protein YIPF7. (270 aa)
	AV530_008416	Uncharacterized protein. (102 aa)
	RAD18	E3 ubiquitin-protein ligase RAD18 isoform C. (568 aa)
	YIPF4	Protein YIPF. (246 aa)
	SHPRH	E3 ubiquitin-protein ligase SHPRH. (1695 aa)
	UBE2L3	Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	HLTF	Helicase-like transcription factor. (904 aa)
	UBE2D3	Ubiquitin-conjugating enzyme E2 D3 isoform B; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	RNF152	E3 ubiquitin-protein ligase RNF152. (203 aa)
	AV530_014171	E3 ubiquitin protein ligase. (79 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	PEX12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (356 aa)
	PEX5L	PEX5-related protein isoform B. (803 aa)
	UBE2D1-2	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	CINP	Cyclin-dependent kinase 2-interacting protein. (211 aa)
	SLC39A13	Zinc transporter ZIP13. (330 aa)
	RTF1	RNA polymerase-associated RTF1-like protein. (670 aa)
	ZC2HC1C	Zinc finger C2HC domain-containing protein 1C. (495 aa)
	UBE2V2	Ubiquitin-conjugating enzyme E2 variant 2. (144 aa)
	PEX2	Peroxisome biogenesis factor 2. (237 aa)
	WAC	WW domain-containing adapter protein with coiled-coil. (644 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_003924	RNF152	A0A1V4L030	A0A1V4JWC9	Ras-related GTP-binding protein A.	E3 ubiquitin-protein ligase RNF152.	0.886
AV530_003924	UBE2N	A0A1V4L030	A0A1V4KMX8	Ras-related GTP-binding protein A.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.626
AV530_008416	AV530_014171	A0A1V4JHV5	A0A1V4JWW5	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.655
AV530_008416	AV530_016124	A0A1V4JHV5	A0A1V4KZC4	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.655
AV530_008416	CINP	A0A1V4JHV5	A0A1V4KAM9	Uncharacterized protein.	Cyclin-dependent kinase 2-interacting protein.	0.781
AV530_008416	HLTF	A0A1V4JHV5	A0A1V4JTQ6	Uncharacterized protein.	Helicase-like transcription factor.	0.434
AV530_008416	RNF20	A0A1V4JHV5	A0A1V4JAS5	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.655
AV530_008416	RPS27A	A0A1V4JHV5	A0A1V4IG00	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.827
AV530_008416	RTF1	A0A1V4JHV5	A0A1V4KEY6	Uncharacterized protein.	RNA polymerase-associated RTF1-like protein.	0.710
AV530_008416	SHPRH	A0A1V4JHV5	A0A1V4JL13	Uncharacterized protein.	E3 ubiquitin-protein ligase SHPRH.	0.434
AV530_008416	UBC	A0A1V4JHV5	A0A1V4K2F8	Uncharacterized protein.	Polyubiquitin-C isoform A.	0.774
AV530_008416	UBE2D1-2	A0A1V4JHV5	A0A1V4K6I4	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.	0.496
AV530_008416	UBE2D2	A0A1V4JHV5	A0A1V4KUZ9	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.	0.496
AV530_008416	UBE2D3	A0A1V4JHV5	A0A1V4JU84	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 D3 isoform B; Belongs to the ubiquitin-conjugating enzyme family.	0.496
AV530_008416	UBE2L3	A0A1V4JHV5	A0A1V4JS29	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family.	0.490
AV530_008416	UBE2N	A0A1V4JHV5	A0A1V4KMX8	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.576
AV530_008416	WDR61	A0A1V4JHV5	A0A1V4JD99	Uncharacterized protein.	WD repeat-containing protein 61.	0.629
AV530_013083	AV530_014171	A0A1V4JA04	A0A1V4JWW5	Histone H2B; Belongs to the histone H2B family.	E3 ubiquitin protein ligase.	0.655
AV530_013083	AV530_016124	A0A1V4JA04	A0A1V4KZC4	Histone H2B; Belongs to the histone H2B family.	E3 ubiquitin protein ligase.	0.655
AV530_013083	CINP	A0A1V4JA04	A0A1V4KAM9	Histone H2B; Belongs to the histone H2B family.	Cyclin-dependent kinase 2-interacting protein.	0.781