STRINGSTRING
RNF103 RNF103 AV530_011559 AV530_011559 MARCH6 MARCH6 AV530_016174 AV530_016174 EDEM3 EDEM3 UBC UBC UGGT1 UGGT1 EDEM1 EDEM1 TRIM55 TRIM55 MARCH8 MARCH8 EDEM2 EDEM2 MARCH7 MARCH7 RNF139 RNF139 MAN1B1 MAN1B1 TRIM54 TRIM54 TRIM59 TRIM59 KXD1 KXD1 AV530_007157 AV530_007157 AV530_007158 AV530_007158 RPS27A RPS27A MARCH3 MARCH3 MARCH1 MARCH1 UGGT2 UGGT2 TRIM13 TRIM13 AV530_012254 AV530_012254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNF103E3 ubiquitin-protein ligase RNF103 isoform B. (706 aa)
AV530_011559Uncharacterized protein. (127 aa)
MARCH6E3 ubiquitin-protein ligase MARCH6 isoform A. (911 aa)
AV530_016174RING-CH-type domain-containing protein. (156 aa)
EDEM3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (888 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
UGGT1UDP-glucose:glycoprotein glucosyltransferase 1 isoform B. (1575 aa)
EDEM1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (539 aa)
TRIM55Tripartite motif-containing protein 55 isoform C. (545 aa)
MARCH8E3 ubiquitin-protein ligase MARCH8 isoform C. (324 aa)
EDEM2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (529 aa)
MARCH7E3 ubiquitin-protein ligase MARCH7 isoform B. (797 aa)
RNF139E3 ubiquitin-protein ligase RNF139. (857 aa)
MAN1B1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (223 aa)
TRIM54Tripartite motif-containing protein 54. (380 aa)
TRIM59Tripartite motif-containing protein 59. (408 aa)
KXD1KxDL motif-containing protein 1. (190 aa)
AV530_007157alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (201 aa)
AV530_007158Uncharacterized protein. (227 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
MARCH3E3 ubiquitin-protein ligase MARCH3 isoform C. (409 aa)
MARCH1E3 ubiquitin-protein ligase MARCH1. (287 aa)
UGGT2UDP-glucose:glycoprotein glucosyltransferase 2. (1522 aa)
TRIM13E3 ubiquitin-protein ligase TRIM13. (455 aa)
AV530_012254Uncharacterized protein. (113 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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