36 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PARK2	RBR-type E3 ubiquitin transferase. (510 aa)
	TUBE1	Tubulin epsilon chain isoform B; Belongs to the tubulin family. (481 aa)
	DYNC1H1	Cytoplasmic dynein 1 heavy chain 1. (4633 aa)
	IFT88	Intraflagellar transport 88-like protein. (859 aa)
	PEX26	Peroxisome assembly protein 26; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (579 aa)
	AV530_019228	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (246 aa)
	TUBA4A	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	AV530_002369	Tubulin domain-containing protein. (96 aa)
	DYNC1I2	Cytoplasmic dynein 1 intermediate chain 2 isoform B. (704 aa)
	AV530_002368	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (352 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	AV530_003286	Dynein light chain. (77 aa)
	AV530_015237	Uncharacterized protein; Belongs to the tubulin family. (649 aa)
	DYNC1LI2	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (477 aa)
	UBE2V1	Ubiquitin-conjugating enzyme E2 variant 1. (178 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	TUBB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
	AV530_002117	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	CFTR	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1485 aa)
	TUBB6	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	ARL13B	ADP-ribosylation factor-like protein 13B. (422 aa)
	AV530_000269	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
	TUBB1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
	AV530_012205	Tubulin domain-containing protein. (103 aa)
	DYNC1LI1	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (532 aa)
	DYNC1I1	Cytoplasmic dynein 1 intermediate chain 1 isoform A. (628 aa)
	UBE2N	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	PARK7	Protein deglycase DJ-1. (173 aa)
	KXD1	KxDL motif-containing protein 1. (190 aa)
	AV530_016230	Tubulin domain-containing protein. (66 aa)
	TUBAL3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (459 aa)
	AV530_004152	Tubulin domain-containing protein; Belongs to the tubulin family. (146 aa)
	CETN3	Centrin-3. (167 aa)
	AV530_016414	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
	AV530_018283	Dynein light chain. (89 aa)
	DYNLL1	Dynein light chain. (139 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL13B	AV530_003286	A0A1V4JBF6	A0A1V4K244	ADP-ribosylation factor-like protein 13B.	Dynein light chain.	0.593
ARL13B	AV530_018283	A0A1V4JBF6	A0A1V4JRL2	ADP-ribosylation factor-like protein 13B.	Dynein light chain.	0.593
ARL13B	CETN3	A0A1V4JBF6	A0A1V4JTU9	ADP-ribosylation factor-like protein 13B.	Centrin-3.	0.657
ARL13B	CFTR	A0A1V4JBF6	A0A1V4J906	ADP-ribosylation factor-like protein 13B.	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.	0.614
ARL13B	DYNC1H1	A0A1V4JBF6	A0A1V4KAE2	ADP-ribosylation factor-like protein 13B.	Cytoplasmic dynein 1 heavy chain 1.	0.603
ARL13B	DYNC1I1	A0A1V4JBF6	A0A1V4KBK2	ADP-ribosylation factor-like protein 13B.	Cytoplasmic dynein 1 intermediate chain 1 isoform A.	0.597
ARL13B	DYNC1I2	A0A1V4JBF6	A0A1V4K6Q2	ADP-ribosylation factor-like protein 13B.	Cytoplasmic dynein 1 intermediate chain 2 isoform B.	0.597
ARL13B	DYNLL1	A0A1V4JBF6	A0A1V4JRA0	ADP-ribosylation factor-like protein 13B.	Dynein light chain.	0.593
ARL13B	IFT88	A0A1V4JBF6	A0A1V4K9X6	ADP-ribosylation factor-like protein 13B.	Intraflagellar transport 88-like protein.	0.840
ARL13B	UBE2N	A0A1V4JBF6	A0A1V4KMX8	ADP-ribosylation factor-like protein 13B.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.630
AV530_000269	AV530_002117	A0A1V4KDG7	A0A1V4J794	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.918
AV530_000269	AV530_015237	A0A1V4KDG7	A0A1V4K1P0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the tubulin family.	0.915
AV530_000269	AV530_016230	A0A1V4KDG7	A0A1V4JWL1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin domain-containing protein.	0.900
AV530_000269	CETN3	A0A1V4KDG7	A0A1V4JTU9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Centrin-3.	0.434
AV530_000269	DYNC1H1	A0A1V4KDG7	A0A1V4KAE2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Cytoplasmic dynein 1 heavy chain 1.	0.798
AV530_000269	DYNC1I1	A0A1V4KDG7	A0A1V4KBK2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Cytoplasmic dynein 1 intermediate chain 1 isoform A.	0.723
AV530_000269	DYNC1I2	A0A1V4KDG7	A0A1V4K6Q2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Cytoplasmic dynein 1 intermediate chain 2 isoform B.	0.723
AV530_000269	RPS27A	A0A1V4KDG7	A0A1V4IG00	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ubiquitin-40S ribosomal protein S27a.	0.453
AV530_000269	TUBB	A0A1V4KDG7	A0A1V4L0F2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.846
AV530_000269	TUBB1	A0A1V4KDG7	A0A1V4KEE8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.919