STRINGSTRING
NBR1 NBR1 PEX5 PEX5 RPS27A RPS27A SQSTM1 SQSTM1 KXD1 KXD1 AV530_019008 AV530_019008 ATM ATM PEX5L PEX5L UBC UBC MAP1LC3B MAP1LC3B GSAP GSAP USP30 USP30
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NBR1Next to BRCA1 1 protein isoform C. (1316 aa)
PEX5Peroxisomal biogenesis factor 5 isoform A. (645 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
SQSTM1Sequestosome-1. (453 aa)
KXD1KxDL motif-containing protein 1. (190 aa)
AV530_019008N_BRCA1_IG domain-containing protein. (255 aa)
ATMNon-specific serine/threonine protein kinase. (3037 aa)
PEX5LPEX5-related protein isoform B. (803 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
MAP1LC3BMicrotubule-associated proteins 1A/1B light chain 3B. (125 aa)
GSAPGamma-secretase-activating protein. (846 aa)
USP30Ubiquitin carboxyl-terminal hydrolase. (435 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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