45 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCAF8	Protein SCAF8 isoform B. (1362 aa)
	AV530_006649	Uncharacterized protein. (144 aa)
	STK38L	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (442 aa)
	SCAF4	Splicing factor, arginine/serine-rich 15 isoform B. (1092 aa)
	AV530_017842	Calponin-homology (CH) domain-containing protein. (121 aa)
	TWF1	Twinfilin-1. (350 aa)
	AV530_019689	Tropomodulin-3. (351 aa)
	COPS2	COP9 signalosome complex subunit 2 isoform B. (450 aa)
	TXNL1	Thioredoxin-like protein 1. (289 aa)
	SRRM1-2	Serine/arginine repetitive matrix protein 1. (173 aa)
	AV530_019951	Uncharacterized protein. (452 aa)
	MYO6	Unconventional myosin-VI isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1263 aa)
	ROCK2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1388 aa)
	CPSF7	Cleavage and polyadenylation specificity factor subunit 7. (406 aa)
	AV530_010972	Calponin-homology (CH) domain-containing protein. (127 aa)
	MSI1	RNA-binding Musashi-like protein 1. (325 aa)
	PDE5A	Phosphodiesterase. (856 aa)
	COPS4	COP9 signalosome complex subunit 4. (406 aa)
	AV530_015064	RNA-binding Raly-like protein. (211 aa)
	MSI2	RNA-binding Musashi-like protein 2 isoform C. (346 aa)
	CCT6A	T-complex protein 1 subunit zeta. (530 aa)
	CUL3	Cullin-3; Belongs to the cullin family. (782 aa)
	GPS1	COP9 signalosome complex subunit 1. (471 aa)
	CCT2	T-complex protein 1 subunit beta. (535 aa)
	TWF2	Twinfilin-2. (349 aa)
	TRA2A	Transformer-2 protein-like protein alpha isoform B. (322 aa)
	ACTN1	Alpha-actinin-1 isoform C. (913 aa)
	RALYL	RNA-binding Raly-like protein isoform A. (408 aa)
	ROCK1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1366 aa)
	RHOBTB2	Rho-related BTB domain-containing protein 2 isoform B. (853 aa)
	RHOBTB1	Rho-related BTB domain-containing protein 1. (694 aa)
	SPEN	Msx2-interacting protein; Belongs to the arginase family. (3162 aa)
	AV530_011422	Msx2-interacting protein-like. (294 aa)
	AV530_006747	Uncharacterized protein. (160 aa)
	CIRBP	Cold-inducible RNA-binding protein isoform A. (191 aa)
	DAZAP1	DAZ-associated protein 1. (236 aa)
	TRA2B	Transformer-2 protein-like protein beta. (468 aa)
	AV530_009552	BTB domain-containing protein. (179 aa)
	AV530_009551	BTB domain-containing protein. (532 aa)
	RBBP6	E3 ubiquitin-protein ligase RBBP6. (1803 aa)
	STK38	Non-specific serine/threonine protein kinase. (541 aa)
	CCT7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (544 aa)
	BRWD3	Bromodomain and WD repeat-containing protein 3. (1795 aa)
	RBMX	RNA-binding motif protein, X chromosome isoform A. (453 aa)
	AV530_002661	Heterogeneous nuclear ribonucleoprotein C-like. (219 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN1	AV530_009551	A0A1V4KFA3	A0A1V4KRY5	Alpha-actinin-1 isoform C.	BTB domain-containing protein.	0.484
ACTN1	AV530_009552	A0A1V4KFA3	A0A1V4KRY3	Alpha-actinin-1 isoform C.	BTB domain-containing protein.	0.484
ACTN1	AV530_019689	A0A1V4KFA3	A0A1V4JEH6	Alpha-actinin-1 isoform C.	Tropomodulin-3.	0.485
ACTN1	RHOBTB1	A0A1V4KFA3	A0A1V4KJX7	Alpha-actinin-1 isoform C.	Rho-related BTB domain-containing protein 1.	0.484
ACTN1	RHOBTB2	A0A1V4KFA3	A0A1V4KJF3	Alpha-actinin-1 isoform C.	Rho-related BTB domain-containing protein 2 isoform B.	0.484
AV530_002661	AV530_006747	A0A1V4KZR3	A0A1V4KQA5	Heterogeneous nuclear ribonucleoprotein C-like.	Uncharacterized protein.	0.477
AV530_002661	AV530_009551	A0A1V4KZR3	A0A1V4KRY5	Heterogeneous nuclear ribonucleoprotein C-like.	BTB domain-containing protein.	0.563
AV530_002661	AV530_009552	A0A1V4KZR3	A0A1V4KRY3	Heterogeneous nuclear ribonucleoprotein C-like.	BTB domain-containing protein.	0.563
AV530_002661	AV530_015064	A0A1V4KZR3	A0A1V4K0S8	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding Raly-like protein.	0.928
AV530_002661	AV530_019951	A0A1V4KZR3	A0A1V4JHK9	Heterogeneous nuclear ribonucleoprotein C-like.	Uncharacterized protein.	0.483
AV530_002661	CCT2	A0A1V4KZR3	A0A1V4K7F4	Heterogeneous nuclear ribonucleoprotein C-like.	T-complex protein 1 subunit beta.	0.558
AV530_002661	CCT7	A0A1V4KZR3	A0A1V4KXV0	Heterogeneous nuclear ribonucleoprotein C-like.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.575
AV530_002661	CIRBP	A0A1V4KZR3	A0A1V4KQB2	Heterogeneous nuclear ribonucleoprotein C-like.	Cold-inducible RNA-binding protein isoform A.	0.893
AV530_002661	CPSF7	A0A1V4KZR3	A0A1V4JPN4	Heterogeneous nuclear ribonucleoprotein C-like.	Cleavage and polyadenylation specificity factor subunit 7.	0.528
AV530_002661	CUL3	A0A1V4KZR3	A0A1V4K3Z3	Heterogeneous nuclear ribonucleoprotein C-like.	Cullin-3; Belongs to the cullin family.	0.426
AV530_002661	DAZAP1	A0A1V4KZR3	A0A1V4KQC0	Heterogeneous nuclear ribonucleoprotein C-like.	DAZ-associated protein 1.	0.477
AV530_002661	MSI1	A0A1V4KZR3	A0A1V4JRB2	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding Musashi-like protein 1.	0.446
AV530_002661	MSI2	A0A1V4KZR3	A0A1V4K1V0	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding Musashi-like protein 2 isoform C.	0.446
AV530_002661	RALYL	A0A1V4KZR3	A0A1V4KGU9	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding Raly-like protein isoform A.	0.928
AV530_002661	RBMX	A0A1V4KZR3	A0A1V4KYL9	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding motif protein, X chromosome isoform A.	0.926