STRINGSTRING
RPS27A RPS27A IKBIP IKBIP AV530_013981 AV530_013981 N4BP1 N4BP1 VWC2 VWC2 AV530_004017 AV530_004017 UBC UBC LRRC45 LRRC45 AV530_011476 AV530_011476 AV530_011478 AV530_011478 VPS28 VPS28 LRRC74A LRRC74A USP14 USP14 TRAF6 TRAF6 IKBKB IKBKB LRRC34 LRRC34 LRRC31 LRRC31 TRAF2 TRAF2 KXD1 KXD1 AV530_001035 AV530_001035 LRRC71 LRRC71 LRRC14 LRRC14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
IKBIPInhibitor of nuclear factor kappa-B kinase-interacting protein. (310 aa)
AV530_013981ANK_REP_REGION domain-containing protein. (66 aa)
N4BP1NEDD4-binding protein 1. (265 aa)
VWC2Brorin. (331 aa)
AV530_004017Caspase-8; Belongs to the peptidase C14A family. (490 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
LRRC45Leucine-rich repeat-containing protein 45. (848 aa)
AV530_011476TPR_REGION domain-containing protein. (211 aa)
AV530_011478Uncharacterized protein. (190 aa)
VPS28Vacuolar sorting-associated protein 28-like protein; Belongs to the VPS28 family. (864 aa)
LRRC74ALeucine-rich repeat-containing protein 74A isoform A. (500 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (492 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)
IKBKBInhibitor of nuclear factor kappa-B kinase subunit beta. (757 aa)
LRRC34Leucine-rich repeat-containing protein 34 isoform A. (472 aa)
LRRC31Leucine-rich repeat-containing protein 31. (582 aa)
TRAF2TNF receptor-associated factor. (472 aa)
KXD1KxDL motif-containing protein 1. (190 aa)
AV530_001035Uncharacterized protein. (1065 aa)
LRRC71Leucine-rich repeat-containing protein 71. (240 aa)
LRRC14Leucine-rich repeat-containing protein 14. (973 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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