11 items (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	YKT6	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)
	ENSANAP00000014141	Uncharacterized protein. (162 aa)
	SCFD1	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (641 aa)
	BET1L	Bet1 golgi vesicular membrane trafficking protein like. (111 aa)
	USO1	USO1 vesicle transport factor. (969 aa)
	STX5	Syntaxin 5; Belongs to the syntaxin family. (361 aa)
	SEC22C	SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (303 aa)
	GOSR1	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
	GOSR2	Uncharacterized protein. (257 aa)
	SEC22A	SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (307 aa)
	ENSANAP00000038785	t-SNARE coiled-coil homology domain-containing protein. (99 aa)

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BET1L	ENSANAP00000014141	ENSANAP00000016743	ENSANAP00000014141	Bet1 golgi vesicular membrane trafficking protein like.	Uncharacterized protein.	0.933
BET1L	GOSR1	ENSANAP00000016743	ENSANAP00000031958	Bet1 golgi vesicular membrane trafficking protein like.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.992
BET1L	GOSR2	ENSANAP00000016743	ENSANAP00000034790	Bet1 golgi vesicular membrane trafficking protein like.	Uncharacterized protein.	0.983
BET1L	SCFD1	ENSANAP00000016743	ENSANAP00000016037	Bet1 golgi vesicular membrane trafficking protein like.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.944
BET1L	SEC22A	ENSANAP00000016743	ENSANAP00000036260	Bet1 golgi vesicular membrane trafficking protein like.	SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.902
BET1L	SEC22C	ENSANAP00000016743	ENSANAP00000031119	Bet1 golgi vesicular membrane trafficking protein like.	SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.878
BET1L	STX5	ENSANAP00000016743	ENSANAP00000022417	Bet1 golgi vesicular membrane trafficking protein like.	Syntaxin 5; Belongs to the syntaxin family.	0.996
BET1L	USO1	ENSANAP00000016743	ENSANAP00000021523	Bet1 golgi vesicular membrane trafficking protein like.	USO1 vesicle transport factor.	0.974
BET1L	YKT6	ENSANAP00000016743	ENSANAP00000001933	Bet1 golgi vesicular membrane trafficking protein like.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.991
ENSANAP00000014141	BET1L	ENSANAP00000014141	ENSANAP00000016743	Uncharacterized protein.	Bet1 golgi vesicular membrane trafficking protein like.	0.933
ENSANAP00000014141	ENSANAP00000038785	ENSANAP00000014141	ENSANAP00000038785	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.932
ENSANAP00000014141	GOSR1	ENSANAP00000014141	ENSANAP00000031958	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.974
ENSANAP00000014141	SCFD1	ENSANAP00000014141	ENSANAP00000016037	Uncharacterized protein.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.964
ENSANAP00000014141	SEC22A	ENSANAP00000014141	ENSANAP00000036260	Uncharacterized protein.	SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.937
ENSANAP00000014141	SEC22C	ENSANAP00000014141	ENSANAP00000031119	Uncharacterized protein.	SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.931
ENSANAP00000014141	STX5	ENSANAP00000014141	ENSANAP00000022417	Uncharacterized protein.	Syntaxin 5; Belongs to the syntaxin family.	0.968
ENSANAP00000014141	USO1	ENSANAP00000014141	ENSANAP00000021523	Uncharacterized protein.	USO1 vesicle transport factor.	0.960
ENSANAP00000014141	YKT6	ENSANAP00000014141	ENSANAP00000001933	Uncharacterized protein.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.969
ENSANAP00000038785	ENSANAP00000014141	ENSANAP00000038785	ENSANAP00000014141	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.932
ENSANAP00000038785	GOSR1	ENSANAP00000038785	ENSANAP00000031958	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.968