(19 nodes) Mixed, incl. Bent DNA binding, and Dual specificity tyrosine-phosphorylation-regulated kinase 1A/1B, catalytic domain network (Aotus nancymaae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSANAP00000003160	Peptidyl-prolyl cis-trans isomerase. (131 aa)
	HIPK2	Homeodomain interacting protein kinase 2. (1203 aa)
	PIN1	Peptidyl-prolyl cis-trans isomerase. (163 aa)
	FAM53C	Family with sequence similarity 53 member C. (393 aa)
	GLCCI1	Glucocorticoid induced 1. (541 aa)
	ENSANAP00000011966	WD_REPEATS_REGION domain-containing protein. (142 aa)
	HIPK1	Homeodomain interacting protein kinase 1. (1210 aa)
	DYRK1A	Dual specificity tyrosine phosphorylation regulated kinase 1A. (781 aa)
	HIPK4	Homeodomain interacting protein kinase 4. (615 aa)
	ENSANAP00000017312	Uncharacterized protein. (112 aa)
	DYRK1B	Dual specificity tyrosine phosphorylation regulated kinase 1B. (629 aa)
	ENSANAP00000020444	Peptidyl-prolyl cis-trans isomerase. (113 aa)
	PIN4	Peptidyl-prolyl cis-trans isomerase. (154 aa)
	ENSANAP00000027955	Peptidyl-prolyl cis-trans isomerase. (120 aa)
	ENSANAP00000028723	Uncharacterized protein. (107 aa)
	FAM117B	Family with sequence similarity 117 member B. (542 aa)
	HIPK3	Homeodomain interacting protein kinase 3. (1215 aa)
	FAM76A	Family with sequence similarity 76 member A. (307 aa)
	SYAP1	Synapse associated protein 1. (358 aa)

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DYRK1A	ENSANAP00000011966	ENSANAP00000014684	ENSANAP00000011966	Dual specificity tyrosine phosphorylation regulated kinase 1A.	WD_REPEATS_REGION domain-containing protein.	0.944
DYRK1A	FAM117B	ENSANAP00000014684	ENSANAP00000028836	Dual specificity tyrosine phosphorylation regulated kinase 1A.	Family with sequence similarity 117 member B.	0.831
DYRK1A	FAM53C	ENSANAP00000014684	ENSANAP00000007638	Dual specificity tyrosine phosphorylation regulated kinase 1A.	Family with sequence similarity 53 member C.	0.842
DYRK1A	GLCCI1	ENSANAP00000014684	ENSANAP00000009281	Dual specificity tyrosine phosphorylation regulated kinase 1A.	Glucocorticoid induced 1.	0.627
DYRK1A	PIN1	ENSANAP00000014684	ENSANAP00000005879	Dual specificity tyrosine phosphorylation regulated kinase 1A.	Peptidyl-prolyl cis-trans isomerase.	0.504
DYRK1B	ENSANAP00000011966	ENSANAP00000019051	ENSANAP00000011966	Dual specificity tyrosine phosphorylation regulated kinase 1B.	WD_REPEATS_REGION domain-containing protein.	0.925
DYRK1B	FAM117B	ENSANAP00000019051	ENSANAP00000028836	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Family with sequence similarity 117 member B.	0.637
DYRK1B	FAM53C	ENSANAP00000019051	ENSANAP00000007638	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Family with sequence similarity 53 member C.	0.776
DYRK1B	FAM76A	ENSANAP00000019051	ENSANAP00000034220	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Family with sequence similarity 76 member A.	0.504
DYRK1B	PIN1	ENSANAP00000019051	ENSANAP00000005879	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Peptidyl-prolyl cis-trans isomerase.	0.504
ENSANAP00000011966	DYRK1A	ENSANAP00000011966	ENSANAP00000014684	WD_REPEATS_REGION domain-containing protein.	Dual specificity tyrosine phosphorylation regulated kinase 1A.	0.944
ENSANAP00000011966	DYRK1B	ENSANAP00000011966	ENSANAP00000019051	WD_REPEATS_REGION domain-containing protein.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.925
ENSANAP00000011966	FAM117B	ENSANAP00000011966	ENSANAP00000028836	WD_REPEATS_REGION domain-containing protein.	Family with sequence similarity 117 member B.	0.544
ENSANAP00000011966	FAM53C	ENSANAP00000011966	ENSANAP00000007638	WD_REPEATS_REGION domain-containing protein.	Family with sequence similarity 53 member C.	0.514
ENSANAP00000011966	HIPK1	ENSANAP00000011966	ENSANAP00000013733	WD_REPEATS_REGION domain-containing protein.	Homeodomain interacting protein kinase 1.	0.803
ENSANAP00000011966	HIPK2	ENSANAP00000011966	ENSANAP00000004379	WD_REPEATS_REGION domain-containing protein.	Homeodomain interacting protein kinase 2.	0.846
ENSANAP00000011966	HIPK3	ENSANAP00000011966	ENSANAP00000032913	WD_REPEATS_REGION domain-containing protein.	Homeodomain interacting protein kinase 3.	0.803
ENSANAP00000011966	HIPK4	ENSANAP00000011966	ENSANAP00000015665	WD_REPEATS_REGION domain-containing protein.	Homeodomain interacting protein kinase 4.	0.803
ENSANAP00000020444	PIN1	ENSANAP00000020444	ENSANAP00000005879	Peptidyl-prolyl cis-trans isomerase.	Peptidyl-prolyl cis-trans isomerase.	0.418
FAM117B	DYRK1A	ENSANAP00000028836	ENSANAP00000014684	Family with sequence similarity 117 member B.	Dual specificity tyrosine phosphorylation regulated kinase 1A.	0.831