18 items (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSANAP00000028970	GOLD domain-containing protein. (183 aa)
	SEC14L5	SEC14 like lipid binding 5. (696 aa)
	TMED5	Transmembrane p24 trafficking protein 5. (229 aa)
	TMED2	Transmembrane p24 trafficking protein 2. (208 aa)
	TMED7	Transmembrane p24 trafficking protein 7. (224 aa)
	TMED9	Transmembrane p24 trafficking protein 9. (235 aa)
	TMED6	GOLD domain-containing protein. (240 aa)
	ENSANAP00000004957	GOLD domain-containing protein. (215 aa)
	SEC14L1	Uncharacterized protein. (760 aa)
	TMED1	Transmembrane p24 trafficking protein 1. (227 aa)
	TMED3	Transmembrane p24 trafficking protein 3. (231 aa)
	TMED10	Transmembrane p24 trafficking protein 10. (219 aa)
	SEC14L2	Uncharacterized protein. (403 aa)
	SEC14L3	SEC14 like lipid binding 3. (400 aa)
	ACBD3	Acyl-CoA binding domain containing 3. (475 aa)
	FYCO1	FYVE and coiled-coil domain containing 1. (1498 aa)
	SEC14L4	SEC14 like lipid binding 4. (413 aa)
	TMED8	Transmembrane p24 trafficking protein family member 8. (326 aa)

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACBD3	TMED9	ENSANAP00000033871	ENSANAP00000014928	Acyl-CoA binding domain containing 3.	Transmembrane p24 trafficking protein 9.	0.497
ENSANAP00000004957	ENSANAP00000028970	ENSANAP00000004957	ENSANAP00000028970	GOLD domain-containing protein.	GOLD domain-containing protein.	0.980
ENSANAP00000004957	TMED1	ENSANAP00000004957	ENSANAP00000016722	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 1.	0.449
ENSANAP00000004957	TMED10	ENSANAP00000004957	ENSANAP00000008488	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 10.	0.980
ENSANAP00000004957	TMED2	ENSANAP00000004957	ENSANAP00000018589	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 2.	0.987
ENSANAP00000004957	TMED3	ENSANAP00000004957	ENSANAP00000009224	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 3.	0.837
ENSANAP00000004957	TMED5	ENSANAP00000004957	ENSANAP00000021483	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 5.	0.449
ENSANAP00000004957	TMED6	ENSANAP00000004957	ENSANAP00000002325	GOLD domain-containing protein.	GOLD domain-containing protein.	0.423
ENSANAP00000004957	TMED7	ENSANAP00000004957	ENSANAP00000017206	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 7.	0.837
ENSANAP00000028970	ENSANAP00000004957	ENSANAP00000028970	ENSANAP00000004957	GOLD domain-containing protein.	GOLD domain-containing protein.	0.980
ENSANAP00000028970	TMED1	ENSANAP00000028970	ENSANAP00000016722	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 1.	0.758
ENSANAP00000028970	TMED2	ENSANAP00000028970	ENSANAP00000018589	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 2.	0.993
ENSANAP00000028970	TMED3	ENSANAP00000028970	ENSANAP00000009224	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 3.	0.903
ENSANAP00000028970	TMED5	ENSANAP00000028970	ENSANAP00000021483	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 5.	0.653
ENSANAP00000028970	TMED6	ENSANAP00000028970	ENSANAP00000002325	GOLD domain-containing protein.	GOLD domain-containing protein.	0.498
ENSANAP00000028970	TMED7	ENSANAP00000028970	ENSANAP00000017206	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 7.	0.879
ENSANAP00000028970	TMED9	ENSANAP00000028970	ENSANAP00000014928	GOLD domain-containing protein.	Transmembrane p24 trafficking protein 9.	0.980
FYCO1	TMED9	ENSANAP00000030390	ENSANAP00000014928	FYVE and coiled-coil domain containing 1.	Transmembrane p24 trafficking protein 9.	0.538
TMED1	ENSANAP00000004957	ENSANAP00000016722	ENSANAP00000004957	Transmembrane p24 trafficking protein 1.	GOLD domain-containing protein.	0.449
TMED1	ENSANAP00000028970	ENSANAP00000016722	ENSANAP00000028970	Transmembrane p24 trafficking protein 1.	GOLD domain-containing protein.	0.758