55 items (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PARP3	Poly [ADP-ribose] polymerase. (539 aa)
	ENSANAP00000000126	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (284 aa)
	POLE4	DNA polymerase epsilon 4, accessory subunit. (119 aa)
	RFC5	Replication factor C subunit 5. (340 aa)
	LOC105716995	RING-type domain-containing protein. (108 aa)
	LOC105706260	Ubiquitin-like domain-containing protein. (154 aa)
	LOC105719658	Ubiquitin-like domain-containing protein. (156 aa)
	BIVM	Uncharacterized protein. (1638 aa)
	RFC3	Replication factor C subunit 3. (356 aa)
	RPA3	Replication protein A3. (134 aa)
	PARP2	Poly [ADP-ribose] polymerase. (550 aa)
	ENSANAP00000007102	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (370 aa)
	DDB1	Damage specific DNA binding protein 1. (1140 aa)
	ERCC2	ERCC excision repair 2, TFIIH core complex helicase subunit. (823 aa)
	RCBTB2	RCC1 and BTB domain containing protein 2. (551 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (603 aa)
	GTF2H1	General transcription factor IIH subunit 1. (556 aa)
	CHD1L	Chromodomain helicase DNA binding protein 1 like. (900 aa)
	POLE2	DNA polymerase epsilon 2, accessory subunit. (467 aa)
	RFC2	Replication factor C subunit 2. (352 aa)
	LOC105720458	CULLIN_2 domain-containing protein; Belongs to the cullin family. (307 aa)
	ENSANAP00000014372	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (276 aa)
	POLD1	DNA polymerase delta 1, catalytic subunit. (1066 aa)
	ENSANAP00000014871	Uncharacterized protein. (107 aa)
	ENSANAP00000016653	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (714 aa)
	GTF2H4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
	RFC1	Replication factor C subunit 1. (1136 aa)
	CUL4A	CULLIN_2 domain-containing protein; Belongs to the cullin family. (739 aa)
	ENSANAP00000019537	Zf-rbx1 domain-containing protein. (116 aa)
	POLD2	DNA polymerase delta 2, accessory subunit. (504 aa)
	POLE3	DNA polymerase epsilon 3, accessory subunit. (176 aa)
	RBX1	Ring-box 1. (108 aa)
	ERCC1	ERCC excision repair 1, endonuclease non-catalytic subunit. (303 aa)
	ERCC4	ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
	GTF2H2	General transcription factor IIH subunit. (395 aa)
	GTF2H5	General transcription factor IIH subunit 5. (71 aa)
	XPA	XPA, DNA damage recognition and repair factor. (273 aa)
	POLD3	DNA polymerase delta 3, accessory subunit. (466 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	LOC105732229	Ubiquitin-like domain-containing protein. (77 aa)
	LOC105713378	Ubiquitin-like domain-containing protein. (77 aa)
	ERCC3	ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
	PARP1	Poly [ADP-ribose] polymerase. (1040 aa)
	POLK	DNA polymerase kappa. (862 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	POLD4	Uncharacterized protein. (107 aa)
	RFC4	Replication factor C subunit 4. (363 aa)
	ENSANAP00000033460	CULLIN_2 domain-containing protein; Belongs to the cullin family. (275 aa)
	GTF2H3	General transcription factor IIH subunit 3. (330 aa)
	ENSANAP00000035706	Ubiquitin-like domain-containing protein. (101 aa)
	ENSANAP00000036022	Uncharacterized protein. (113 aa)
	DDB2	Damage specific DNA binding protein 2. (427 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	CUL4B	Cullin 4B; Belongs to the cullin family. (937 aa)

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIVM	CHD1L	ENSANAP00000004069	ENSANAP00000012862	Uncharacterized protein.	Chromodomain helicase DNA binding protein 1 like.	0.852
BIVM	CUL4A	ENSANAP00000004069	ENSANAP00000018923	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.576
BIVM	CUL4B	ENSANAP00000004069	ENSANAP00000040874	Uncharacterized protein.	Cullin 4B; Belongs to the cullin family.	0.576
BIVM	DDB1	ENSANAP00000004069	ENSANAP00000007973	Uncharacterized protein.	Damage specific DNA binding protein 1.	0.861
BIVM	DDB2	ENSANAP00000004069	ENSANAP00000038122	Uncharacterized protein.	Damage specific DNA binding protein 2.	0.731
BIVM	ENSANAP00000000126	ENSANAP00000004069	ENSANAP00000000126	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.706
BIVM	ENSANAP00000007102	ENSANAP00000004069	ENSANAP00000007102	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.706
BIVM	ENSANAP00000014372	ENSANAP00000004069	ENSANAP00000014372	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.706
BIVM	ENSANAP00000014871	ENSANAP00000004069	ENSANAP00000014871	Uncharacterized protein.	Uncharacterized protein.	0.542
BIVM	ENSANAP00000016653	ENSANAP00000004069	ENSANAP00000016653	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.706
BIVM	ENSANAP00000019537	ENSANAP00000004069	ENSANAP00000019537	Uncharacterized protein.	Zf-rbx1 domain-containing protein.	0.524
BIVM	ENSANAP00000033460	ENSANAP00000004069	ENSANAP00000033460	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.576
BIVM	ERCC1	ENSANAP00000004069	ENSANAP00000023566	Uncharacterized protein.	ERCC excision repair 1, endonuclease non-catalytic subunit.	0.895
BIVM	ERCC2	ENSANAP00000004069	ENSANAP00000009404	Uncharacterized protein.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.971
BIVM	ERCC3	ENSANAP00000004069	ENSANAP00000026816	Uncharacterized protein.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.984
BIVM	ERCC4	ENSANAP00000004069	ENSANAP00000023806	Uncharacterized protein.	ERCC excision repair 4, endonuclease catalytic subunit.	0.917
BIVM	GTF2H1	ENSANAP00000004069	ENSANAP00000011498	Uncharacterized protein.	General transcription factor IIH subunit 1.	0.986
BIVM	GTF2H2	ENSANAP00000004069	ENSANAP00000024020	Uncharacterized protein.	General transcription factor IIH subunit.	0.957
BIVM	GTF2H3	ENSANAP00000004069	ENSANAP00000034173	Uncharacterized protein.	General transcription factor IIH subunit 3.	0.730
BIVM	GTF2H4	ENSANAP00000004069	ENSANAP00000016850	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.701