STRINGSTRING
AFY54601.1 AFY54601.1 AFY55936.1 AFY55936.1 glgB glgB AFY53850.1 AFY53850.1 AFY55563.1 AFY55563.1 AFY54449.1 AFY54449.1 AFY54610.1 AFY54610.1 AFY54611.1 AFY54611.1 AFY57919.1 AFY57919.1 AFY57204.1 AFY57204.1 AFY57116.1 AFY57116.1 AFY56102.1 AFY56102.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFY54601.1PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family. (780 aa)
AFY55936.11,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family. (552 aa)
glgBAlpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (765 aa)
AFY53850.1Glycosidase; PFAM: Alpha amylase, catalytic domain. (486 aa)
AFY55563.1Glycosidase; PFAM: Alpha amylase, catalytic domain. (659 aa)
AFY54449.1Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain. (1058 aa)
AFY54610.1Isoamylase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (717 aa)
AFY54611.1Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase. (1132 aa)
AFY57919.1Glycosidase; PFAM: Alpha amylase, catalytic domain. (494 aa)
AFY57204.1Glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (703 aa)
AFY57116.1Glycosidase; PFAM: Starch binding domain; Alpha amylase, catalytic domain. (648 aa)
AFY56102.1Glycosidase; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain. (441 aa)
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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