STRINGSTRING
DVH24_030732 DVH24_030732 DVH24_016308 DVH24_016308 DVH24_005913 DVH24_005913 DVH24_033280 DVH24_033280 DVH24_024617 DVH24_024617 DVH24_008547 DVH24_008547 DVH24_010413 DVH24_010413 DVH24_021426 DVH24_021426 DVH24_003912 DVH24_003912 DVH24_003173 DVH24_003173
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DVH24_030732Uncharacterized protein. (146 aa)
DVH24_016308Uncharacterized protein. (88 aa)
DVH24_005913Uncharacterized protein. (136 aa)
DVH24_033280Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (268 aa)
DVH24_024617Uncharacterized protein. (496 aa)
DVH24_008547WD_REPEATS_REGION domain-containing protein. (466 aa)
DVH24_010413CP-type G domain-containing protein. (592 aa)
DVH24_021426WD_REPEATS_REGION domain-containing protein. (776 aa)
DVH24_00391260S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
DVH24_003173Brix domain-containing protein. (354 aa)
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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