STRINGSTRING
DVH24_023986 DVH24_023986 DVH24_028007 DVH24_028007 DVH24_031215 DVH24_031215 DVH24_016441 DVH24_016441 DVH24_019380 DVH24_019380 DVH24_019379 DVH24_019379 DVH24_019381 DVH24_019381 DVH24_001912 DVH24_001912 DVH24_005175 DVH24_005175 DVH24_003335 DVH24_003335 DVH24_042037 DVH24_042037 DVH24_032516 DVH24_032516 DVH24_020973 DVH24_020973 DVH24_033280 DVH24_033280 DVH24_003912 DVH24_003912 DVH24_038104 DVH24_038104 DVH24_038105 DVH24_038105 DVH24_038298 DVH24_038298 DVH24_004124 DVH24_004124 DVH24_023245 DVH24_023245 C2H2L5 C2H2L5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DVH24_023986Uncharacterized protein. (716 aa)
DVH24_028007Uncharacterized protein. (318 aa)
DVH24_03121560S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (173 aa)
DVH24_016441Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (283 aa)
DVH24_019380Uncharacterized protein. (485 aa)
DVH24_019379Uncharacterized protein. (936 aa)
DVH24_019381Uncharacterized protein. (427 aa)
DVH24_001912Uncharacterized protein. (77 aa)
DVH24_005175Uncharacterized protein. (1852 aa)
DVH24_003335Protein MAK16 homolog; Belongs to the MAK16 family. (300 aa)
DVH24_042037Uncharacterized protein. (765 aa)
DVH24_032516Uncharacterized protein. (353 aa)
DVH24_020973C2H2-type domain-containing protein. (405 aa)
DVH24_033280Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (268 aa)
DVH24_00391260S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
DVH24_038104Uncharacterized protein. (99 aa)
DVH24_038105Uncharacterized protein. (91 aa)
DVH24_038298Uncharacterized protein. (68 aa)
DVH24_004124Ribosomal_L28e domain-containing protein. (441 aa)
DVH24_023245Uncharacterized protein. (752 aa)
C2H2L5C2H2L domain class transcription factor. (405 aa)
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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