18 items (Malus domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DVH24_034694	CBF domain-containing protein. (698 aa)
	DVH24_000534	Uncharacterized protein. (776 aa)
	DVH24_013612	Uncharacterized protein. (93 aa)
	DVH24_013611	CBF domain-containing protein. (182 aa)
	DVH24_009025	Bms1-type G domain-containing protein. (791 aa)
	DVH24_010139	CBF domain-containing protein. (565 aa)
	DVH24_017550	Uncharacterized protein. (143 aa)
	DVH24_033867	RIO domain-containing protein. (470 aa)
	DVH24_007285	Uncharacterized protein. (950 aa)
	DVH24_001752	Uncharacterized protein. (353 aa)
	DVH24_040585	Uncharacterized protein. (832 aa)
	DVH24_019875	Uncharacterized protein. (635 aa)
	DVH24_023622	Bms1-type G domain-containing protein. (791 aa)
	DVH24_039243	RIO domain-containing protein. (470 aa)
	DVH24_012961	Uncharacterized protein. (686 aa)
	DVH24_018798	Uncharacterized protein. (557 aa)
	DVH24_040584	Uncharacterized protein. (71 aa)
	DVH24_002071	Uncharacterized protein. (556 aa)

Your Current Organism:

Malus domestica

NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVH24_000534	DVH24_001752	A0A498J2J7	A0A498I7S6	Uncharacterized protein.	Uncharacterized protein.	0.547
DVH24_000534	DVH24_002071	A0A498J2J7	A0A498IBR3	Uncharacterized protein.	Uncharacterized protein.	0.523
DVH24_000534	DVH24_007285	A0A498J2J7	A0A498HG91	Uncharacterized protein.	Uncharacterized protein.	0.573
DVH24_000534	DVH24_009025	A0A498J2J7	A0A498JTM3	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.850
DVH24_000534	DVH24_010139	A0A498J2J7	A0A498JVH5	Uncharacterized protein.	CBF domain-containing protein.	0.458
DVH24_000534	DVH24_012961	A0A498J2J7	A0A498HUU1	Uncharacterized protein.	Uncharacterized protein.	0.412
DVH24_000534	DVH24_013611	A0A498J2J7	A0A498JDU9	Uncharacterized protein.	CBF domain-containing protein.	0.458
DVH24_000534	DVH24_013612	A0A498J2J7	A0A498JCZ7	Uncharacterized protein.	Uncharacterized protein.	0.458
DVH24_000534	DVH24_018798	A0A498J2J7	A0A498HRH3	Uncharacterized protein.	Uncharacterized protein.	0.523
DVH24_000534	DVH24_019875	A0A498J2J7	A0A498I4X0	Uncharacterized protein.	Uncharacterized protein.	0.809
DVH24_000534	DVH24_023622	A0A498J2J7	A0A498I0H0	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.850
DVH24_000534	DVH24_034694	A0A498J2J7	A0A498J0A8	Uncharacterized protein.	CBF domain-containing protein.	0.458
DVH24_000534	DVH24_040584	A0A498J2J7	A0A498IBP6	Uncharacterized protein.	Uncharacterized protein.	0.573
DVH24_000534	DVH24_040585	A0A498J2J7	A0A498I6S4	Uncharacterized protein.	Uncharacterized protein.	0.573
DVH24_001752	DVH24_000534	A0A498I7S6	A0A498J2J7	Uncharacterized protein.	Uncharacterized protein.	0.547
DVH24_001752	DVH24_012961	A0A498I7S6	A0A498HUU1	Uncharacterized protein.	Uncharacterized protein.	0.418
DVH24_002071	DVH24_000534	A0A498IBR3	A0A498J2J7	Uncharacterized protein.	Uncharacterized protein.	0.523
DVH24_002071	DVH24_007285	A0A498IBR3	A0A498HG91	Uncharacterized protein.	Uncharacterized protein.	0.619
DVH24_002071	DVH24_009025	A0A498IBR3	A0A498JTM3	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.599
DVH24_002071	DVH24_010139	A0A498IBR3	A0A498JVH5	Uncharacterized protein.	CBF domain-containing protein.	0.685

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