STRINGSTRING
RD1_0533 RD1_0533 RD1_0783 RD1_0783 RD1_0784 RD1_0784 RD1_0785 RD1_0785 RD1_0786 RD1_0786 RD1_0787 RD1_0787 RD1_0788 RD1_0788 RD1_0789 RD1_0789 RD1_0790 RD1_0790 RD1_2015 RD1_2015 RD1_2016 RD1_2016 RD1_2017 RD1_2017 RD1_2837 RD1_2837
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RD1_0533Metallo-beta-lactamase family protein. (292 aa)
RD1_0783Sulfate transporter, permease protein, putative. (581 aa)
RD1_0784Conserved hypothetical protein. (559 aa)
RD1_0785Metallo-beta-lactamase family protein. (293 aa)
RD1_0786Conserved hypothetical protein. (142 aa)
RD1_0787YeeE/YedE domain protein. (143 aa)
RD1_0788Hypothetical protein. (70 aa)
RD1_0789Cyclic nucleotide-binding protein, putative. (220 aa)
RD1_0790Conserved hypothetical protein. (156 aa)
RD1_2015Hypothetical protein. (210 aa)
RD1_2016TrkA-C domain protein. (590 aa)
RD1_2017Hypothetical protein. (32 aa)
RD1_2837Conserved hypothetical protein. (141 aa)
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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