(5 nodes) Ferric binding protein, and Polyamine transmembrane transport network (Roseobacter denitrificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	RD1_1059	Iron ABC transporter iron-binding protein, putative. (341 aa)
	RD1_1060	Iron ABC transporter, permease protein, putative. (739 aa)
	fbpC	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (358 aa)
	RD1_4030	Fe-ABC transporter, permease component. (551 aa)
	RD1_4033	Iron ABC transporter, iron-binding protein, putative. (327 aa)

Your Current Organism:

Roseobacter denitrificans

NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RD1_1059	RD1_1060	RD1_1059	RD1_1060	Iron ABC transporter iron-binding protein, putative.	Iron ABC transporter, permease protein, putative.	0.994
RD1_1059	RD1_4030	RD1_1059	RD1_4030	Iron ABC transporter iron-binding protein, putative.	Fe-ABC transporter, permease component.	0.971
RD1_1059	RD1_4033	RD1_1059	RD1_4033	Iron ABC transporter iron-binding protein, putative.	Iron ABC transporter, iron-binding protein, putative.	0.926
RD1_1059	fbpC	RD1_1059	RD1_1061	Iron ABC transporter iron-binding protein, putative.	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.990
RD1_1060	RD1_1059	RD1_1060	RD1_1059	Iron ABC transporter, permease protein, putative.	Iron ABC transporter iron-binding protein, putative.	0.994
RD1_1060	RD1_4030	RD1_1060	RD1_4030	Iron ABC transporter, permease protein, putative.	Fe-ABC transporter, permease component.	0.925
RD1_1060	RD1_4033	RD1_1060	RD1_4033	Iron ABC transporter, permease protein, putative.	Iron ABC transporter, iron-binding protein, putative.	0.971
RD1_1060	fbpC	RD1_1060	RD1_1061	Iron ABC transporter, permease protein, putative.	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.990
RD1_4030	RD1_1059	RD1_4030	RD1_1059	Fe-ABC transporter, permease component.	Iron ABC transporter iron-binding protein, putative.	0.971
RD1_4030	RD1_1060	RD1_4030	RD1_1060	Fe-ABC transporter, permease component.	Iron ABC transporter, permease protein, putative.	0.925
RD1_4030	RD1_4033	RD1_4030	RD1_4033	Fe-ABC transporter, permease component.	Iron ABC transporter, iron-binding protein, putative.	0.989
RD1_4030	fbpC	RD1_4030	RD1_1061	Fe-ABC transporter, permease component.	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.936
RD1_4033	RD1_1059	RD1_4033	RD1_1059	Iron ABC transporter, iron-binding protein, putative.	Iron ABC transporter iron-binding protein, putative.	0.926
RD1_4033	RD1_1060	RD1_4033	RD1_1060	Iron ABC transporter, iron-binding protein, putative.	Iron ABC transporter, permease protein, putative.	0.971
RD1_4033	RD1_4030	RD1_4033	RD1_4030	Iron ABC transporter, iron-binding protein, putative.	Fe-ABC transporter, permease component.	0.989
RD1_4033	fbpC	RD1_4033	RD1_1061	Iron ABC transporter, iron-binding protein, putative.	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.904
fbpC	RD1_1059	RD1_1061	RD1_1059	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Iron ABC transporter iron-binding protein, putative.	0.990
fbpC	RD1_1060	RD1_1061	RD1_1060	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Iron ABC transporter, permease protein, putative.	0.990
fbpC	RD1_4030	RD1_1061	RD1_4030	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Fe-ABC transporter, permease component.	0.936
fbpC	RD1_4033	RD1_1061	RD1_4033	Fe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	Iron ABC transporter, iron-binding protein, putative.	0.904

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