STRINGSTRING
RD1_0517 RD1_0517 RD1_0518 RD1_0518 RD1_0519 RD1_0519 RD1_0521 RD1_0521 RD1_1480 RD1_1480 mtlK mtlK RD1_1482 RD1_1482 RD1_1483 RD1_1483 RD1_1484 RD1_1484 RD1_1485 RD1_1485 RD1_1486 RD1_1486 RD1_1487 RD1_1487 nagA nagA RD1_1726 RD1_1726 RD1_1727 RD1_1727 RD1_1728 RD1_1728 RD1_1729 RD1_1729 RD1_1730 RD1_1730 RD1_1731 RD1_1731 RD1_1732 RD1_1732 RD1_1733 RD1_1733 bglA bglA RD1_2320 RD1_2320 RD1_2321 RD1_2321 aglE aglE aglF aglF aglA aglA aglK aglK gltK gltK RD1_2553 RD1_2553 lacK lacK RD1_2861 RD1_2861 RD1_2862 RD1_2862 RD1_2863 RD1_2863 RD1_2864 RD1_2864 rafA rafA RD1_2866 RD1_2866 dgoK dgoK dgoA dgoA bgaT bgaT frk frk ugpE-2 ugpE-2 ugpC ugpC ugpE ugpE ugpA ugpA upgB upgB galM galM RD1_3567 RD1_3567 RD1_3569 RD1_3569 RD1_3570 RD1_3570 RD1_3571 RD1_3571 RD1_3572 RD1_3572 RD1_3619 RD1_3619 RD1_3620 RD1_3620 RD1_3621 RD1_3621 RD1_3622 RD1_3622 rpiB rpiB tpiA-2 tpiA-2 RD1_3626 RD1_3626 RD1_3628 RD1_3628 xylB-2 xylB-2 RD1_3630 RD1_3630 glpD-2 glpD-2 fucA fucA RD1_3634 RD1_3634 RD1_3635 RD1_3635 ugpC-2 ugpC-2 RD1_3638 RD1_3638 RD1_3639 RD1_3639 RD1_3640 RD1_3640 eryD eryD nadX nadX RD1_3717 RD1_3717 RD1_3718 RD1_3718 RD1_3719 RD1_3719 RD1_3720 RD1_3720 algS algS RD1_3722 RD1_3722 RD1_3739 RD1_3739 RD1_3740 RD1_3740 RD1_3742 RD1_3742 RD1_3743 RD1_3743 spaT spaT RD1_3878 RD1_3878 RD1_3879 RD1_3879 RD1_3880 RD1_3880 RD1_3881 RD1_3881 y4oQ y4oQ RD1_3883 RD1_3883 RD1_3884 RD1_3884 RD1_4114 RD1_4114 RD1_4115 RD1_4115 RD1_4116 RD1_4116 RD1_4117 RD1_4117 RD1_4118 RD1_4118 RD1_4119 RD1_4119 ugpC-3 ugpC-3 RD1_4122 RD1_4122 RD1_4123 RD1_4123 RD1_4124 RD1_4124 RD1_4201 RD1_4201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RD1_0517Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (367 aa)
RD1_0518Sugar ABC transporter, permease protein, putative. (293 aa)
RD1_0519Sugar ABC transporter, permease protein, putative. (297 aa)
RD1_0521Putative sugar ABC transporter, periplasmic sugar-binding protein. (416 aa)
RD1_1480Hypothetical protein. (82 aa)
mtlKMannitol 2-dehydrogenase. (493 aa)
RD1_1482Hypothetical protein. (53 aa)
RD1_1483Sugar transport ATP-binding transport protein, putative; Belongs to the ABC transporter superfamily. (334 aa)
RD1_1484Sugar ABC transporter, permease protein, putative. (276 aa)
RD1_1485Sugar ABC transporter, permease protein, putative. (288 aa)
RD1_1486Periplasmic sorbitol-binding protein, putative. (435 aa)
RD1_1487Transcriptional regulator, lacI family, putative. (343 aa)
nagAN-acetylglucosamine-6-phosphate deacetylase. (376 aa)
RD1_1726SIS domain protein. (342 aa)
RD1_1727Transcriptional regulator, GntR family, putative. (254 aa)
RD1_1728Putative N-acetylglucosamine kinase. (297 aa)
RD1_1729Sugar ABC transporter, periplasmic sugar-binding protein. (418 aa)
RD1_1730Putative sugar ABC transporter, permease protein. (307 aa)
RD1_1731Putative sugar ABC transporter, permease protein. (279 aa)
RD1_1732Oxidoreductase, putative. (342 aa)
RD1_1733Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (332 aa)
bglABeta-glucosidase; Methylamine utilization protein MauG, putative. (437 aa)
RD1_2320Transcriptional regulator, putative. (342 aa)
RD1_2321Hypothetical protein. (30 aa)
aglEAlpha-glucoside transporter, periplasmic binding protein AglE. (450 aa)
aglFAlpha-glucoside transporter, permease protein AglF. (326 aa)
aglAAlpha-glucosidase; Alpha-glucoside transporter, permease protein AglG. (550 aa)
aglKAlpha-glucoside transporter, ATP-binding protein AglK; Belongs to the ABC transporter superfamily. (365 aa)
gltKGlucose ABC transporter, ATP-binding subunit. (202 aa)
RD1_2553ABC transporter, permease protein, putative. (142 aa)
lacKLactose ABC transporter, ATP-binding protein. (352 aa)
RD1_2861Transcriptional regulator, IclR family. (263 aa)
RD1_2862ABC transporter, substrate-binding protein, putative. (419 aa)
RD1_2863Sugar ABC transporter, permease protein, putative. (308 aa)
RD1_2864ABC transporter, permease protein, putative. (282 aa)
rafAAlpha-galactosidase. (694 aa)
RD1_2866Oxidoreductase, putative. (256 aa)
dgoK2-dehydro-3-deoxygalactonokinase, putative. (301 aa)
dgoA2-dehydro-3-deoxy-6-phosphogalactonate aldolase, putative. (201 aa)
bgaTBeta-galactosidase. (636 aa)
frkFructokinase. (310 aa)
ugpE-2Glycerol-3-phosphate ABC transporter, permease component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (300 aa)
ugpCSN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (358 aa)
ugpEGlycerol-3-phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
ugpAGlycerol-3-phosphate ABC transporter, permease protein. (292 aa)
upgBGlycerol-3-phosphate-binding periplasmic protein precursor, putative. (431 aa)
galMAldose 1-epimerase, putative. (322 aa)
RD1_3567Na+/Pi-cotransporter, putative. (551 aa)
RD1_3569Inner membrane component of binding-protein-dependent transport system. (269 aa)
RD1_3570Glycerol-3-phosphate ABC transporter, permease protein, putative. (297 aa)
RD1_3571Glycerol-3-phosphate ABC transporter, periplasmic binding protein. (422 aa)
RD1_3572Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (339 aa)
RD1_3619ABC transporter, permease protein, putative. (307 aa)
RD1_3620Sugar ABC transporter permease protein, putative. (297 aa)
RD1_3621ABC transporter, substrate-binding protein, putative. (473 aa)
RD1_3622SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (359 aa)
rpiBRibose-5-phosphate isomerase B, putative. (151 aa)
tpiA-2Triosephosphate isomerase. (258 aa)
RD1_3626Conserved hypothetical protein. (310 aa)
RD1_3628Hydrolase, putative. (276 aa)
xylB-2Xylulose kinase, putative. (412 aa)
RD1_3630Conserved hypothetical protein. (325 aa)
glpD-2Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (499 aa)
fucAL-fuculose phosphate aldolase. (217 aa)
RD1_3634FGGY family of carbohydrate kinases; Belongs to the FGGY kinase family. (522 aa)
RD1_3635Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (374 aa)
ugpC-2SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily. (369 aa)
RD1_3638Sugar ABC transporter, permease protein, putative. (285 aa)
RD1_3639ABC transporter permease protein, putative. (307 aa)
RD1_3640Sugar ABC transporter, substrate-binding, putative. (481 aa)
eryDEry operon repressor, putative. (318 aa)
nadXConserved hypothetical protein; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate. (260 aa)
RD1_3717Hypothetical protein. (254 aa)
RD1_3718Sugar ABC transporter, permease protein, putative. (311 aa)
RD1_3719Sugar ABC transporter, permease protein, putative. (304 aa)
RD1_3720Sugar ABC transporter, periplasmic binding protein, putative. (442 aa)
algSAlginate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (362 aa)
RD1_3722Transcriptional regulator, LacI family, putative. (346 aa)
RD1_3739Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (345 aa)
RD1_3740Solute-binding protein, putative. (543 aa)
RD1_3742Sugar ABC transporter, permease protein, putative. (325 aa)
RD1_3743Sugar ABC transporter, permease protein, putative. (291 aa)
spaTSubtilin transport ATP-binding protein, putative. (607 aa)
RD1_3878Sugar kinase, putative. (314 aa)
RD1_3879Hypothetical protein. (95 aa)
RD1_3880Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (364 aa)
RD1_3881Sugar ABC transporter, permease protein, putative. (289 aa)
y4oQABC transporter, permease protein. putative. (305 aa)
RD1_3883ABC transporter, periplasmic substrate-binding protein, putative. (486 aa)
RD1_3884Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (373 aa)
RD1_4114BlaR1 peptidase M56 domain protein. (379 aa)
RD1_4115Transcriptional regulator, putative. (132 aa)
RD1_4116Conserved hypothetical protein. (132 aa)
RD1_4117Sugar ABC transporter, permease protein, putative. (265 aa)
RD1_4118Sugar ABC transporter, permease protein, putative. (287 aa)
RD1_4119Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (357 aa)
ugpC-3SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily. (354 aa)
RD1_4122Sugar ABC transporter, periplasmic sugar-binding protein, putative. (577 aa)
RD1_4123Hypothetical protein. (48 aa)
RD1_4124Hypothetical protein. (31 aa)
RD1_4201ABC transporter, ATP-binding protein, putative. (297 aa)
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.