STRINGSTRING
phaA phaA RD1_4183 RD1_4183 RD1_4090 RD1_4090 RD1_2060 RD1_2060 RD1_2083 RD1_2083 RD1_3547 RD1_3547 phaF phaF phaC-2 phaC-2 dinF dinF RD1_1220 RD1_1220 RD1_1689 RD1_1689 kefC kefC RD1_2470 RD1_2470 RD1_3698 RD1_3698
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phaApH adaption potassium efflux system protein PhaA. (957 aa)
RD1_4183Hypothetical protein. (138 aa)
RD1_4090Sodium/calcium exchanger protein, putative. (315 aa)
RD1_2060MATE efflux family protein. (502 aa)
RD1_2083MATE efflux family protein, putative. (452 aa)
RD1_3547Putative potassium efflux system protein. (129 aa)
phaFpH adaptation potassium efflux system protein. (95 aa)
phaC-2pH adaption potassium efflux system protein. (120 aa)
dinFDNA-damage-inducible protein, putative. (446 aa)
RD1_1220MATE efflux pump protein. (449 aa)
RD1_1689Putative potassium efflux transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (523 aa)
kefCGlutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (627 aa)
RD1_2470MatE efflux family protein. (445 aa)
RD1_3698Sodium/hydrogen exchanger family, putative. (838 aa)
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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