Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RD1_0557 | thiP | RD1_0557 | RD1_0558 | Thiamin ABC transporter, periplasmic thiamin-binding protein. | Thiamine transport system permease protein thiP. | 0.995 |
| RD1_1059 | RD1_4033 | RD1_1059 | RD1_4033 | Iron ABC transporter iron-binding protein, putative. | Iron ABC transporter, iron-binding protein, putative. | 0.926 |
| RD1_1059 | thiP | RD1_1059 | RD1_0558 | Iron ABC transporter iron-binding protein, putative. | Thiamine transport system permease protein thiP. | 0.458 |
| RD1_4033 | RD1_1059 | RD1_4033 | RD1_1059 | Iron ABC transporter, iron-binding protein, putative. | Iron ABC transporter iron-binding protein, putative. | 0.926 |
| RD1_4033 | thiP | RD1_4033 | RD1_0558 | Iron ABC transporter, iron-binding protein, putative. | Thiamine transport system permease protein thiP. | 0.458 |
| cobD | cobQ | RD1_1330 | RD1_2180 | Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.993 |
| cobQ | cobD | RD1_2180 | RD1_1330 | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.993 |
| thiP | RD1_0557 | RD1_0558 | RD1_0557 | Thiamine transport system permease protein thiP. | Thiamin ABC transporter, periplasmic thiamin-binding protein. | 0.995 |
| thiP | RD1_1059 | RD1_0558 | RD1_1059 | Thiamine transport system permease protein thiP. | Iron ABC transporter iron-binding protein, putative. | 0.458 |
| thiP | RD1_4033 | RD1_0558 | RD1_4033 | Thiamine transport system permease protein thiP. | Iron ABC transporter, iron-binding protein, putative. | 0.458 |