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opuAA opuAA potG potG potA-2 potA-2 potA-3 potA-3 RD1_0331 RD1_0331 RD1_0371 RD1_0371 RD1_0407 RD1_0407 RD1_0408 RD1_0408 RD1_0486 RD1_0486 RD1_0517 RD1_0517 RD1_0543 RD1_0543 RD1_0544 RD1_0544 RD1_0593 RD1_0593 RD1_0594 RD1_0594 RD1_0703 RD1_0703 RD1_0709 RD1_0709 RD1_0754 RD1_0754 RD1_0771 RD1_0771 RD1_0858 RD1_0858 RD1_0859 RD1_0859 RD1_0865 RD1_0865 RD1_0904 RD1_0904 troB troB tauB tauB RD1_1025 RD1_1025 phnC phnC fbpC fbpC RD1_1102 RD1_1102 RD1_1124 RD1_1124 RD1_1159 RD1_1159 RD1_1227 RD1_1227 RD1_1237 RD1_1237 RD1_1266 RD1_1266 RD1_1483 RD1_1483 RD1_1501 RD1_1501 RD1_1503 RD1_1503 nosF nosF ftsE ftsE RD1_1645 RD1_1645 prsD prsD RD1_1733 RD1_1733 bceA bceA RD1_1749 RD1_1749 RD1_1775 RD1_1775 RD1_1861 RD1_1861 RD1_1899 RD1_1899 RD1_1973 RD1_1973 RD1_1976 RD1_1976 lolD lolD RD1_2162 RD1_2162 RD1_2163 RD1_2163 RD1_2184 RD1_2184 RD1_2211 RD1_2211 RD1_2221 RD1_2221 RD1_2222 RD1_2222 RD1_2240 RD1_2240 aglK aglK RD1_2343 RD1_2343 RD1_2364 RD1_2364 RD1_2382 RD1_2382 phnL phnL phnK phnK phnC-2 phnC-2 potA potA RD1_2414 RD1_2414 RD1_2427 RD1_2427 ccmA ccmA gltK gltK RD1_2578 RD1_2578 RD1_2628 RD1_2628 RD1_2630 RD1_2630 pstB pstB RD1_2675 RD1_2675 sufC sufC RD1_2846 RD1_2846 RD1_2847 RD1_2847 lacK lacK RD1_2910 RD1_2910 modC modC opuAA-2 opuAA-2 ugpC ugpC uvrA uvrA RD1_3050 RD1_3050 rbsA rbsA RD1_3099 RD1_3099 yheS yheS RD1_3149 RD1_3149 RD1_3243 RD1_3243 RD1_3260 RD1_3260 RD1_3481 RD1_3481 RD1_3572 RD1_3572 RD1_3587 RD1_3587 RD1_3588 RD1_3588 RD1_3600 RD1_3600 RD1_3601 RD1_3601 RD1_3622 RD1_3622 RD1_3635 RD1_3635 ugpC-2 ugpC-2 algS algS RD1_3725 RD1_3725 RD1_3726 RD1_3726 RD1_3739 RD1_3739 spaT spaT potA-4 potA-4 RD1_3880 RD1_3880 RD1_3884 RD1_3884 RD1_3954 RD1_3954 znuC znuC RD1_4031 RD1_4031 RD1_4071 RD1_4071 RD1_4093 RD1_4093 RD1_4119 RD1_4119 ugpC-3 ugpC-3 potA-5 potA-5 nasD nasD hmuV hmuV RD1_4201 RD1_4201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
opuAAGlycine betaine transporter, ATP-binding protein. (344 aa)
potGPutrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (375 aa)
potA-2Polyamine ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (371 aa)
potA-3ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (361 aa)
RD1_0331ABC transporter subunit, putative. (980 aa)
RD1_0371ABC transporter, ATP-binding protein, putative. (252 aa)
RD1_0407ABC transporter, transmembrane ATP-binding protein. (610 aa)
RD1_0408ABC transporter, transmembrane ATP-binding protein. (612 aa)
RD1_0486Sugar ABC transporter, ATP-binding protein, putative. (264 aa)
RD1_0517Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (367 aa)
RD1_0543ABC transporter subunit, putative. (249 aa)
RD1_0544ABC transporter, ATP-binding protein, putative. (228 aa)
RD1_0593Putative cyclosin secreting ABC transporter, ATP binding protein. (745 aa)
RD1_0594ABC transporter, ATP-binding permease protein, putative. (552 aa)
RD1_0703Branched-chain amino acid ABC transporter, ATP-binding protein, putative. (272 aa)
RD1_0709Branched-chain amino acid ABC transporter, ATP-binding protein, putative. (275 aa)
RD1_0754ABC transporter, ATP-binding protein, putative. (229 aa)
RD1_0771ABC transporter, ATP-binding protein, putative. (315 aa)
RD1_0858Branched-chain amino acid ABC transporter, ATP-binding protein. (260 aa)
RD1_0859Branched-chain amino acid ABC transporter, ATP-binding protein. (240 aa)
RD1_0865Sugar ABC transporter, ATP-binding protein, putative. (519 aa)
RD1_0904ABC transporter, putative. (199 aa)
troBZinc ABC transporter, ATP-binding protein. (277 aa)
tauBTaurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (268 aa)
RD1_1025ABC transporter, ATP-binding protein, putative. (259 aa)
phnCPhosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (263 aa)
fbpCFe-ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (358 aa)
RD1_1102ABC transporter ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (591 aa)
RD1_1124Toxin secretion ABC transporter, ATP-binding component, putative. (756 aa)
RD1_1159ABC transporter, ATP-binding protein, putative. (239 aa)
RD1_1227ABC transporter, ATP-binding protein, putative. (229 aa)
RD1_1237ABC transporter, ATP-binding protein, putative. (551 aa)
RD1_1266Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (526 aa)
RD1_1483Sugar transport ATP-binding transport protein, putative; Belongs to the ABC transporter superfamily. (334 aa)
RD1_1501Branched-chain amino acid ABC transporter, ATP-binding protein. (236 aa)
RD1_1503Branched-chain amino acid ABC transporter, ATP-binding protein. (234 aa)
nosFCopper transport ATP-binding protein NosF. (300 aa)
ftsECell division ATP-binding protein, putative. (225 aa)
RD1_1645Sugar ABC transporter, ATP-binding protein. (525 aa)
prsDType I secretion system ATPase. (576 aa)
RD1_1733Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (332 aa)
bceABacitracin export ATP-binding protein. (233 aa)
RD1_1749Efflux ABC transporter, transmembrane ATP-binding protein, putative. (617 aa)
RD1_1775ABC transporter, ATP-binding protein, putative. (612 aa)
RD1_1861ABC transporter, ATP-binding protein, putative. (241 aa)
RD1_1899Amino acid ABC transporter, ATP-binding protein. (258 aa)
RD1_1973ABC transporter, ATP-binding protein, putative. (641 aa)
RD1_1976ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (545 aa)
lolDABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (227 aa)
RD1_2162ABC transporter, ATP-binding protein, putative. (235 aa)
RD1_2163Putative ABC transporter, ATP-binding component. (246 aa)
RD1_2184Amino acid ABC transporter, ATP-binding protein, putative. (245 aa)
RD1_2211Sugar ABC transporter, ATP-binding protein, putative. (257 aa)
RD1_2221Oligopeptide ABC transporter, ATP-binding subunit; Belongs to the ABC transporter superfamily. (320 aa)
RD1_2222Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (324 aa)
RD1_2240ABC transporter, ATP-binding protein, putative. (230 aa)
aglKAlpha-glucoside transporter, ATP-binding protein AglK; Belongs to the ABC transporter superfamily. (365 aa)
RD1_2343ABC transporter, ATP-binding protein, putative. (248 aa)
RD1_2364Spermidine/putrescine ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (361 aa)
RD1_2382Sugar uptake ABC transporter ATP-binding protein, putative. (505 aa)
phnLPhosphonate C-P lyase system protein PhnL. (227 aa)
phnKPhosphonate C-P lyase system protein PhnK. (256 aa)
phnC-2Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (271 aa)
potASpermidine/putrescine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)
RD1_2414Spermidine/putrescine ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (342 aa)
RD1_2427ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (378 aa)
ccmAHeme ABC exporter, ATP-binding protein CcmA, putative; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (206 aa)
gltKGlucose ABC transporter, ATP-binding subunit. (202 aa)
RD1_2578ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (696 aa)
RD1_2628Branched-chain amino acid ABC transporter, ATP-binding protein. (274 aa)
RD1_2630Branched-chain amino acid ABC transporter, ATP-binding protein. (265 aa)
pstBPhosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (265 aa)
RD1_2675Fe-ABC transporter, ATP-binding subunit, putative. (256 aa)
sufCFeS assembly ATPase SufC. (251 aa)
RD1_2846Branched-chain amino acid ABC transporter, ATP-binding protein. (254 aa)
RD1_2847Branched-chain amino acid ABC transporter, ATP-binding protein, putative. (251 aa)
lacKLactose ABC transporter, ATP-binding protein. (352 aa)
RD1_2910Tungstate ABC transporter, ATP-binding protein. (236 aa)
modCMolybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (365 aa)
opuAA-2Glycine betaine transporter, ATP-binding protein. (342 aa)
ugpCSN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (358 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (952 aa)
RD1_3050ABC transporter, permease protein, putative. (1006 aa)
rbsARibose transport ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (511 aa)
RD1_3099ABC transporter, ATP-binding protein, putative. (260 aa)
yheSABC transporter ATP-binding protein yheS, putative. (620 aa)
RD1_3149ABC transporter, ATP-binding protein, putative. (602 aa)
RD1_3243ABC transporter, ATP-binding protein, putative. (248 aa)
RD1_3260Iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)
RD1_3481Iron ABC transporter, ATP-binding protein, putative. (260 aa)
RD1_3572Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (339 aa)
RD1_3587Branched-chain amino acid ABC transporter, ATP-binding protein, putative. (242 aa)
RD1_3588Branched chain amino acid ABC transporter, ATP-binding protein, putative. (244 aa)
RD1_3600Branched-chain amino acid ABC transport, ATP-binding protein, putative. (251 aa)
RD1_3601ABC transporter, ATP-binding protein, putative. (229 aa)
RD1_3622SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (359 aa)
RD1_3635Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (374 aa)
ugpC-2SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily. (369 aa)
algSAlginate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (362 aa)
RD1_3725Toxin secretion ABC transporter, ATP binding protein, putative. (575 aa)
RD1_3726Toxin secretion ABC transporter, ATP binding component, putative. (696 aa)
RD1_3739Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (345 aa)
spaTSubtilin transport ATP-binding protein, putative. (607 aa)
potA-4Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (355 aa)
RD1_3880Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (364 aa)
RD1_3884Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (373 aa)
RD1_3954Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (351 aa)
znuCZinc ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (255 aa)
RD1_4031ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (360 aa)
RD1_4071Sugar ABC transporter, ATP-binding protein, putative. (504 aa)
RD1_4093ABC transporter, ATP-binding protein, putative. (312 aa)
RD1_4119Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. (357 aa)
ugpC-3SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily. (354 aa)
potA-5Polyamine ABC transporter, ATP-binding component, putative; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (363 aa)
nasDNitrate ABC transporter protein, ATP binding component. (552 aa)
hmuVHemin ABC transporter protein, ATP-binding component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (261 aa)
RD1_4201ABC transporter, ATP-binding protein, putative. (297 aa)
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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