STRINGSTRING
RD1_0678 RD1_0678 RD1_1287 RD1_1287 RD1_1051 RD1_1051 RD1_0847 RD1_0847 RD1_1716 RD1_1716 RD1_2176 RD1_2176 RD1_2186 RD1_2186 RD1_2313 RD1_2313 RD1_2334 RD1_2334 RD1_3608 RD1_3608 RD1_3771 RD1_3771 RD1_3993 RD1_3993 RD1_4101 RD1_4101 tauL tauL RD1_0741 RD1_0741 RD1_1541 RD1_1541 RD1_0240 RD1_0240 RD1_1477 RD1_1477
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RD1_0678TRAP dicarboxylate transporter, DctQ subunit, putative. (207 aa)
RD1_1287Conserved hypothetical protein. (190 aa)
RD1_1051TRAP dicarboxylate transporter, DctQ subunit, putative. (164 aa)
RD1_0847TRAP dicarboxylate transporter, DctQ subunit, putative. (193 aa)
RD1_1716TRAP transporter, DctQ-like membrane protein, putative. (165 aa)
RD1_2176Conserved hypothetical protein. (185 aa)
RD1_2186TRAP transporter, DctQ-like subunit, putative. (173 aa)
RD1_2313C4-dicarboxylate transport system, permease small protein, putative. (196 aa)
RD1_2334TRAP dicarboxylate transporter, DctQ subunit, putative. (209 aa)
RD1_3608TRAP transporter, DctQ-like membrane protein, putative. (164 aa)
RD1_3771TRAP transporter, DctQ-like membrane protein, putative. (233 aa)
RD1_3993C4-dicarboxylate ABC transporter, permease component, putative. (175 aa)
RD1_4101TRAP dicarboxylate transporter, DctQ subunit, putative. (222 aa)
tauLC4-dicarboxylate transport system, small permease protein, putative. (188 aa)
RD1_0741Conserved hypothetical protein. (180 aa)
RD1_1541ABC transporte, permease protein, putative. (192 aa)
RD1_0240Membrane protein, putative. (174 aa)
RD1_1477Membrane protein, putative. (200 aa)
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.