STRINGSTRING
SFR55724.1 SFR55724.1 SFR55731.1 SFR55731.1 SFR55741.1 SFR55741.1 SFR55747.1 SFR55747.1 SFR55763.1 SFR55763.1 SFR55772.1 SFR55772.1 SFR55781.1 SFR55781.1 SFR55788.1 SFR55788.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFR55724.1Positive regulator of sigma(E), RseC/MucC. (149 aa)
SFR55731.1Sigma E regulatory protein, MucB/RseB. (335 aa)
SFR55741.1sigma-E factor negative regulatory protein RseA. (186 aa)
SFR55747.1RNA polymerase sigma-70 factor, ECF subfamily. (228 aa)
SFR55763.1Antitoxin CptB. (90 aa)
SFR55772.1Toxin CptA. (154 aa)
SFR55781.1Hypothetical protein. (330 aa)
SFR55788.1HD-like signal output (HDOD) domain, no enzymatic activity. (277 aa)
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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