(156 nodes) Chromatin organization, and Structural constituent of chromatin network (Prunus persica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRUPE_8G033600	SET domain-containing protein. (683 aa)
	PRUPE_8G017300	Uncharacterized protein. (106 aa)
	PRUPE_8G137800	Uncharacterized protein. (1049 aa)
	PRUPE_8G201800	Uncharacterized protein. (2045 aa)
	PRUPE_8G248100	Uncharacterized protein. (214 aa)
	PRUPE_8G266200	Uncharacterized protein. (909 aa)
	PRUPE_7G011400	SET domain-containing protein. (351 aa)
	PRUPE_7G029000	Uncharacterized protein. (858 aa)
	PRUPE_7G028900	Uncharacterized protein. (891 aa)
	PRUPE_7G085000	SET domain-containing protein. (331 aa)
	PRUPE_7G053300	Uncharacterized protein. (1516 aa)
	PRUPE_7G164200	FHA domain-containing protein. (821 aa)
	PRUPE_7G167200	Uncharacterized protein. (370 aa)
	PRUPE_7G130900	Uncharacterized protein. (916 aa)
	PRUPE_7G182800	HMG box domain-containing protein. (145 aa)
	PRUPE_7G246800	Uncharacterized protein; Belongs to the actin family. (425 aa)
	PRUPE_6G021800	Uncharacterized protein. (487 aa)
	PRUPE_6G052100	Uncharacterized protein. (241 aa)
	PRUPE_6G076700	MBD domain-containing protein. (244 aa)
	PRUPE_6G084300	Uncharacterized protein. (281 aa)
	PRUPE_6G084500	Uncharacterized protein. (153 aa)
	PRUPE_6G088700	Uncharacterized protein. (1400 aa)
	PRUPE_6G226500	Uncharacterized protein. (562 aa)
	PRUPE_6G228700	MRG domain-containing protein. (318 aa)
	PRUPE_6G245300	Uncharacterized protein. (573 aa)
	PRUPE_6G192500	Uncharacterized protein. (898 aa)
	PRUPE_6G312100	Uncharacterized protein. (375 aa)
	PRUPE_6G312500	TPR_REGION domain-containing protein. (941 aa)
	PRUPE_6G339800	Uncharacterized protein. (225 aa)
	PRUPE_6G344800	Uncharacterized protein. (461 aa)
	PRUPE_6G351600	Uncharacterized protein. (1576 aa)
	PRUPE_6G357700	Uncharacterized protein. (301 aa)
	PRUPE_6G357400	Uncharacterized protein. (956 aa)
	PRUPE_5G027400	Uncharacterized protein. (377 aa)
	PRUPE_5G057400	Uncharacterized protein. (1136 aa)
	PRUPE_5G060700	VEFS-Box domain-containing protein. (428 aa)
	PRUPE_5G094800	Uncharacterized protein. (932 aa)
	PRUPE_5G099000	Uncharacterized protein. (1851 aa)
	PRUPE_5G151800	COMM domain-containing protein. (200 aa)
	PRUPE_5G204500	Hist_deacetyl domain-containing protein. (667 aa)
	PRUPE_5G217800	RanBP2-type domain-containing protein. (596 aa)
	PRUPE_4G015400	Uncharacterized protein. (216 aa)
	PRUPE_4G040600	Uncharacterized protein. (1393 aa)
	PRUPE_4G114900	Uncharacterized protein. (2337 aa)
	PRUPE_4G135700	Uncharacterized protein. (2143 aa)
	PRUPE_4G152500	VEFS-Box domain-containing protein. (617 aa)
	PRUPE_4G154200	Uncharacterized protein; Belongs to the actin family. (442 aa)
	PRUPE_4G227800	Uncharacterized protein. (748 aa)
	PRUPE_4G227700	Uncharacterized protein. (788 aa)
	PRUPE_4G272300	Hist_deacetyl domain-containing protein. (445 aa)
	PRUPE_4G254200	B30.2/SPRY domain-containing protein. (436 aa)
	PRUPE_4G286600	Uncharacterized protein. (775 aa)
	PRUPE_4G234500	Histone domain-containing protein. (84 aa)
	PRUPE_3G028400	Enhancer of polycomb-like protein. (462 aa)
	PRUPE_3G147500	Uncharacterized protein. (1315 aa)
	PRUPE_3G163200	Uncharacterized protein. (96 aa)
	PRUPE_3G222600	SET domain-containing protein. (2437 aa)
	PRUPE_3G276200	Uncharacterized protein. (146 aa)
	PRUPE_3G276300	HDAC_interact domain-containing protein. (1396 aa)
	PRUPE_3G300100	Uncharacterized protein. (1116 aa)
	PRUPE_3G301900	Uncharacterized protein. (171 aa)
	PRUPE_3G313600	Uncharacterized protein. (677 aa)
	PRUPE_2G016900	Hist_deacetyl domain-containing protein. (94 aa)
	PRUPE_2G036000	Uncharacterized protein. (203 aa)
	PRUPE_2G042400	Uncharacterized protein. (1126 aa)
	PRUPE_2G107000	Chromo domain-containing protein. (450 aa)
	PRUPE_2G187600	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1027 aa)
	PRUPE_2G122400	Uncharacterized protein. (877 aa)
	PRUPE_2G211400	Uncharacterized protein. (1553 aa)
	PRUPE_2G231800	Uncharacterized protein. (240 aa)
	PRUPE_2G185400	Histone domain-containing protein. (180 aa)
	PRUPE_2G311000	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1082 aa)
	PRUPE_1G010200	Uncharacterized protein. (112 aa)
	PRUPE_1G008100	Uncharacterized protein. (395 aa)
	PRUPE_1G034800	Uncharacterized protein. (1216 aa)
	PRUPE_1G042700	Uncharacterized protein. (96 aa)
	PRUPE_1G103200	Uncharacterized protein. (706 aa)
	PRUPE_1G111000	BCNT-C domain-containing protein. (281 aa)
	PRUPE_1G112300	Uncharacterized protein. (97 aa)
	PRUPE_1G101500	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (511 aa)
	PRUPE_1G143200	Uncharacterized protein. (3278 aa)
	PRUPE_1G169000	Uncharacterized protein; Belongs to the histone H2B family. (56 aa)
	PRUPE_1G216000	Uncharacterized protein. (670 aa)
	PRUPE_1G262300	HDAC_interact domain-containing protein. (1446 aa)
	PRUPE_1G350600	Uncharacterized protein. (1056 aa)
	PRUPE_1G358300	Uncharacterized protein. (332 aa)
	PRUPE_1G391600	Uncharacterized protein. (1439 aa)
	PRUPE_1G429500	MRG domain-containing protein. (334 aa)
	PRUPE_1G559800	Plus3 domain-containing protein. (550 aa)
	PRUPE_1G574100	Uncharacterized protein. (534 aa)
	PRUPE_1G582800	Plus3 domain-containing protein. (855 aa)
	PRUPE_8G165500	WD_REPEATS_REGION domain-containing protein. (403 aa)
	PRUPE_8G089400	Uncharacterized protein. (216 aa)
	PRUPE_8G233200	Histone H2A; Belongs to the histone H2A family. (138 aa)
	PRUPE_8G183700	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (495 aa)
	PRUPE_8G250000	Histone H2A; Belongs to the histone H2A family. (141 aa)
	PRUPE_8G250100	Histone H2A; Belongs to the histone H2A family. (138 aa)
	PRUPE_8G082000	Uncharacterized protein. (272 aa)
	PRUPE_7G169600	Uncharacterized protein. (302 aa)
	PRUPE_7G236800	Histone H2A; Belongs to the histone H2A family. (135 aa)
	PRUPE_7G146600	Uncharacterized protein. (1515 aa)
	PRUPE_7G158200	acidPPc domain-containing protein. (299 aa)
	PRUPE_8G224100	Uncharacterized protein. (156 aa)
	PRUPE_7G167100	Uncharacterized protein. (275 aa)
	PRUPE_6G137000	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	PRUPE_6G143900	Hist_deacetyl domain-containing protein. (382 aa)
	PRUPE_6G322100	Histone H2A; Belongs to the histone H2A family. (195 aa)
	PRUPE_6G048500	HIT-type domain-containing protein. (172 aa)
	PRUPE_6G228600	Uncharacterized protein. (162 aa)
	PRUPE_6G113500	Histone H2B; Belongs to the histone H2B family. (144 aa)
	PRUPE_6G250200	Histone H2A; Belongs to the histone H2A family. (152 aa)
	PRUPE_6G082300	Histone H2A; Belongs to the histone H2A family. (150 aa)
	PRUPE_6G332900	Histone H2A; Belongs to the histone H2A family. (141 aa)
	PRUPE_7G166400	H15 domain-containing protein. (190 aa)
	PRUPE_6G122500	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (430 aa)
	PRUPE_5G115800	Uncharacterized protein. (500 aa)
	PRUPE_5G058900	WD_REPEATS_REGION domain-containing protein. (512 aa)
	PRUPE_6G322000	Histone H2A; Belongs to the histone H2A family. (151 aa)
	PRUPE_6G082700	Histone H2B; Belongs to the histone H2B family. (148 aa)
	PRUPE_4G202200	WD_REPEATS_REGION domain-containing protein. (371 aa)
	PRUPE_6G035300	Uncharacterized protein. (330 aa)
	PRUPE_6G114300	Histone domain-containing protein; Belongs to the histone H2B family. (305 aa)
	PRUPE_4G054300	Histone H3; Belongs to the histone H3 family. (136 aa)
	PRUPE_5G167200	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (467 aa)
	PRUPE_4G188600	SWIRM domain-containing protein. (748 aa)
	PRUPE_4G258700	Uncharacterized protein. (1761 aa)
	PRUPE_6G250100	Histone H2B; Belongs to the histone H2B family. (134 aa)
	PRUPE_3G212300	Uncharacterized protein. (216 aa)
	PRUPE_3G089800	PX domain-containing protein. (781 aa)
	PRUPE_2G110700	WD_REPEATS_REGION domain-containing protein. (422 aa)
	PRUPE_2G323000	YL1_C domain-containing protein. (357 aa)
	PRUPE_4G029500	Histone H2A; Belongs to the histone H2A family. (132 aa)
	PRUPE_2G248000	Uncharacterized protein. (519 aa)
	PRUPE_4G200700	Histone H2A; Belongs to the histone H2A family. (135 aa)
	PRUPE_2G172900	Uncharacterized protein. (2271 aa)
	PRUPE_2G237600	Uncharacterized protein; Belongs to the actin family. (724 aa)
	PRUPE_3G006800	SANT domain-containing protein. (445 aa)
	PRUPE_3G049900	WD_REPEATS_REGION domain-containing protein. (468 aa)
	PRUPE_2G207000	Uncharacterized protein. (413 aa)
	PRUPE_1G503800	Uncharacterized protein. (480 aa)
	PRUPE_1G210500	SET domain-containing protein. (418 aa)
	PRUPE_1G544700	RuvB-like helicase; Belongs to the RuvB family. (463 aa)
	PRUPE_2G314600	Uncharacterized protein. (351 aa)
	PRUPE_1G075500	Uncharacterized protein. (698 aa)
	PRUPE_1G177800	Uncharacterized protein. (1091 aa)
	PRUPE_1G413100	Hist_deacetyl domain-containing protein. (404 aa)
	PRUPE_2G084200	Enhancer of polycomb-like protein. (832 aa)
	PRUPE_2G215600	Uncharacterized protein. (1721 aa)
	PRUPE_1G050800	Uncharacterized protein. (672 aa)
	PRUPE_2G224400	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (83 aa)
	PRUPE_1G506200	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (445 aa)
	PRUPE_1G356300	SWIRM domain-containing protein. (813 aa)
	PRUPE_1G428200	Uncharacterized protein. (558 aa)
	PRUPE_1G035000	Uncharacterized protein; Belongs to the actin family. (592 aa)
	PRUPE_1G472200	Histone H2A; Belongs to the histone H2A family. (136 aa)
	PRUPE_1G369600	Histone H3; Belongs to the histone H3 family. (136 aa)

Your Current Organism:

Prunus persica

NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PRUPE_1G008100	PRUPE_1G010200	A0A251QQZ1	A0A251QQY3	Uncharacterized protein.	Uncharacterized protein.	0.646
PRUPE_1G008100	PRUPE_1G034800	A0A251QQZ1	A0A251QS98	Uncharacterized protein.	Uncharacterized protein.	0.609
PRUPE_1G008100	PRUPE_1G035000	A0A251QQZ1	M5XYD0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.841
PRUPE_1G008100	PRUPE_1G103200	A0A251QQZ1	A0A251QVH1	Uncharacterized protein.	Uncharacterized protein.	0.609
PRUPE_1G008100	PRUPE_1G143200	A0A251QQZ1	A0A251QXJ6	Uncharacterized protein.	Uncharacterized protein.	0.911
PRUPE_1G008100	PRUPE_1G169000	A0A251QQZ1	A0A251QZQ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the histone H2B family.	0.697
PRUPE_1G008100	PRUPE_1G262300	A0A251QQZ1	A0A251R6B1	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.646
PRUPE_1G008100	PRUPE_1G350600	A0A251QQZ1	A0A251R828	Uncharacterized protein.	Uncharacterized protein.	0.609
PRUPE_1G008100	PRUPE_1G356300	A0A251QQZ1	M5XXK9	Uncharacterized protein.	SWIRM domain-containing protein.	0.680
PRUPE_1G008100	PRUPE_1G358300	A0A251QQZ1	A0A251R8B8	Uncharacterized protein.	Uncharacterized protein.	0.723
PRUPE_1G008100	PRUPE_1G369600	A0A251QQZ1	M5Y074	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.813
PRUPE_1G008100	PRUPE_1G391600	A0A251QQZ1	A0A251RA87	Uncharacterized protein.	Uncharacterized protein.	0.758
PRUPE_1G008100	PRUPE_1G413100	A0A251QQZ1	M5XLE0	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.830
PRUPE_1G008100	PRUPE_1G429500	A0A251QQZ1	A0A251RBW7	Uncharacterized protein.	MRG domain-containing protein.	0.664
PRUPE_1G008100	PRUPE_1G472200	A0A251QQZ1	M5Y070	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.871
PRUPE_1G008100	PRUPE_1G544700	A0A251QQZ1	M5XFR4	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.635
PRUPE_1G008100	PRUPE_1G559800	A0A251QQZ1	A0A251RIV1	Uncharacterized protein.	Plus3 domain-containing protein.	0.807
PRUPE_1G008100	PRUPE_1G582800	A0A251QQZ1	A0A251RJW6	Uncharacterized protein.	Plus3 domain-containing protein.	0.807
PRUPE_1G008100	PRUPE_2G016900	A0A251QQZ1	A0A251Q9J7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.830
PRUPE_1G008100	PRUPE_2G110700	A0A251QQZ1	M5X021	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.828

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