STRINGSTRING
PRUPE_3G291100 PRUPE_3G291100 PRUPE_4G071200 PRUPE_4G071200 PRUPE_7G053600 PRUPE_7G053600 PRUPE_6G114000 PRUPE_6G114000 PRUPE_8G015700 PRUPE_8G015700 PRUPE_8G015200 PRUPE_8G015200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRUPE_3G291100Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (600 aa)
PRUPE_4G071200Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (559 aa)
PRUPE_7G053600Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (683 aa)
PRUPE_6G114000BOP1NT domain-containing protein. (668 aa)
PRUPE_8G015700Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (590 aa)
PRUPE_8G015200Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (590 aa)
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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