STRINGSTRING
TOP6B TOP6B PRUPE_8G180500 PRUPE_8G180500 PRUPE_7G061000 PRUPE_7G061000 PRUPE_8G128300 PRUPE_8G128300 TEF2 TEF2 PRUPE_1G555900 PRUPE_1G555900 PRUPE_1G333400 PRUPE_1G333400 PRUPE_1G067200 PRUPE_1G067200 PRUPE_2G329900 PRUPE_2G329900 PRUPE_2G038600 PRUPE_2G038600 PRUPE_2G017500 PRUPE_2G017500 PRUPE_3G056500 PRUPE_3G056500 PRUPE_4G138900 PRUPE_4G138900 PRUPE_4G129900 PRUPE_4G129900 PRUPE_5G105600 PRUPE_5G105600 PRUPE_5G026300 PRUPE_5G026300 PRUPE_6G340200 PRUPE_6G340200 PRUPE_6G197200 PRUPE_6G197200 PRUPE_6G104100 PRUPE_6G104100 PRUPE_7G183500 PRUPE_7G183500 PRUPE_7G014600 PRUPE_7G014600 PRUPE_8G259200 PRUPE_8G259200 PRUPE_1G154800 PRUPE_1G154800 PRUPE_1G295600 PRUPE_1G295600 AGK AGK ARA ARA PRUPE_1G013300 PRUPE_1G013300 PRUPE_3G201400 PRUPE_3G201400 PRUPE_2G192700 PRUPE_2G192700 PRUPE_3G288400 PRUPE_3G288400 PRUPE_1G363900 PRUPE_1G363900 PRUPE_2G134500 PRUPE_2G134500 PRUPE_2G301300 PRUPE_2G301300 PRUPE_1G011800 PRUPE_1G011800 PRUPE_1G449000 PRUPE_1G449000 PRUPE_3G056900 PRUPE_3G056900 PRUPE_4G141700 PRUPE_4G141700 PRUPE_3G036300 PRUPE_3G036300 PRUPE_2G078900 PRUPE_2G078900 PRUPE_4G254800 PRUPE_4G254800 PRUPE_3G198900 PRUPE_3G198900 PRUPE_3G293800 PRUPE_3G293800 PRUPE_5G050100 PRUPE_5G050100 PRUPE_4G269400 PRUPE_4G269400 PRUPE_2G075700 PRUPE_2G075700 PRUPE_4G129500 PRUPE_4G129500 PRUPE_6G313300 PRUPE_6G313300 PRUPE_4G049400 PRUPE_4G049400 PRUPE_5G076600 PRUPE_5G076600 PRUPE_6G104200 PRUPE_6G104200 PRUPE_6G327600 PRUPE_6G327600 PRUPE_6G028600 PRUPE_6G028600 PRUPE_7G033800 PRUPE_7G033800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TOP6BDNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (692 aa)
PRUPE_8G180500Uncharacterized protein. (370 aa)
PRUPE_7G061000Uncharacterized protein. (299 aa)
PRUPE_8G128300Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
TEF2Translation elongation factor 2. (843 aa)
PRUPE_1G555900DNA_mis_repair domain-containing protein. (732 aa)
PRUPE_1G333400Uncharacterized protein. (320 aa)
PRUPE_1G067200Uncharacterized protein. (431 aa)
PRUPE_2G329900S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (508 aa)
PRUPE_2G038600Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1012 aa)
PRUPE_2G017500DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1472 aa)
PRUPE_3G056500RECA_2 domain-containing protein. (647 aa)
PRUPE_4G138900Tr-type G domain-containing protein. (843 aa)
PRUPE_4G129900Tr-type G domain-containing protein. (1027 aa)
PRUPE_5G105600HATPase_c domain-containing protein. (643 aa)
PRUPE_5G026300Uncharacterized protein. (509 aa)
PRUPE_6G340200Uncharacterized protein. (312 aa)
PRUPE_6G197200UPF0029 domain-containing protein. (255 aa)
PRUPE_6G104100Uncharacterized protein. (261 aa)
PRUPE_7G183500Uncharacterized protein. (1237 aa)
PRUPE_7G014600S1 motif domain-containing protein. (938 aa)
PRUPE_8G259200Uncharacterized protein. (942 aa)
PRUPE_1G154800Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
PRUPE_1G295600HATPase_c domain-containing protein. (797 aa)
AGKD-galactokinase. (502 aa)
ARAL-arabinokinase. (992 aa)
PRUPE_1G013300Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (285 aa)
PRUPE_3G201400HATPase_c domain-containing protein. (813 aa)
PRUPE_2G192700Uncharacterized protein. (1086 aa)
PRUPE_3G288400S1 motif domain-containing protein. (962 aa)
PRUPE_1G363900HATPase_c domain-containing protein. (815 aa)
PRUPE_2G134500Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (763 aa)
PRUPE_2G301300HATPase_c domain-containing protein. (703 aa)
PRUPE_1G011800Uncharacterized protein. (241 aa)
PRUPE_1G449000RNase_PH domain-containing protein. (243 aa)
PRUPE_3G056900Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (369 aa)
PRUPE_4G141700Uncharacterized protein. (282 aa)
PRUPE_3G036300Tr-type G domain-containing protein. (988 aa)
PRUPE_2G078900Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (419 aa)
PRUPE_4G254800Uncharacterized protein. (457 aa)
PRUPE_3G198900Uncharacterized protein. (287 aa)
PRUPE_3G293800GHMP_kinases_N domain-containing protein. (361 aa)
PRUPE_5G050100Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (888 aa)
PRUPE_4G269400GHMP_kinases_N domain-containing protein. (395 aa)
PRUPE_2G075700S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (273 aa)
PRUPE_4G129500Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (207 aa)
PRUPE_6G313300Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (997 aa)
PRUPE_4G049400S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (312 aa)
PRUPE_5G076600Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (779 aa)
PRUPE_6G104200Uncharacterized protein. (257 aa)
PRUPE_6G327600Mevalonate kinase. (387 aa)
PRUPE_6G028600HATPase_c domain-containing protein. (699 aa)
PRUPE_7G033800DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (738 aa)
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.