47 items (Prunus persica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRUPE_1G400900	Uncharacterized protein. (1005 aa)
	PRUPE_1G105800	Protein-serine/threonine kinase. (369 aa)
	PRUPE_1G034300	Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway. (764 aa)
	PRUPE_3G201400	HATPase_c domain-containing protein. (813 aa)
	PRUPE_3G201700	Uncharacterized protein. (1245 aa)
	PRUPE_3G198200	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
	PRUPE_5G145400	Uncharacterized protein. (1722 aa)
	PRUPE_5G145600	Uncharacterized protein. (1706 aa)
	PRUPE_7G163400	Morc6_S5 domain-containing protein. (607 aa)
	PRUPE_7G170700	Uncharacterized protein. (1242 aa)
	PRUPE_6G028600	HATPase_c domain-containing protein. (699 aa)
	PRUPE_7G033800	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (738 aa)
	TOP6B	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (692 aa)
	PRUPE_6G348000	Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway. (756 aa)
	PRUPE_6G302500	Uncharacterized protein. (1055 aa)
	PRUPE_8G271500	Uncharacterized protein. (503 aa)
	PRUPE_1G555900	DNA_mis_repair domain-containing protein. (732 aa)
	PRUPE_1G417200	Uncharacterized protein. (1753 aa)
	PRUPE_1G336400	Uncharacterized protein. (1022 aa)
	PRUPE_1G246300	Uncharacterized protein. (630 aa)
	PRUPE_1G221200	Morc6_S5 domain-containing protein. (785 aa)
	PRUPE_1G159200	DUF3883 domain-containing protein. (2740 aa)
	PRUPE_1G159000	CCHC-type domain-containing protein. (2273 aa)
	PRUPE_2G309600	Uncharacterized protein. (1312 aa)
	PRUPE_2G018500	TOP4c domain-containing protein. (560 aa)
	PRUPE_2G017500	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1472 aa)
	PRUPE_3G289000	Morc6_S5 domain-containing protein. (627 aa)
	PRUPE_4G073900	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1136 aa)
	PRUPE_5G147000	Morc6_S5 domain-containing protein. (841 aa)
	PRUPE_5G145800	Uncharacterized protein. (430 aa)
	PRUPE_5G145900	Uncharacterized protein. (1691 aa)
	PRUPE_5G105600	HATPase_c domain-containing protein. (643 aa)
	PRUPE_5G041100	Uncharacterized protein. (55 aa)
	PRUPE_6G314200	Uncharacterized protein. (1032 aa)
	PRUPE_6G157300	Morc6_S5 domain-containing protein. (681 aa)
	PRUPE_7G183500	Uncharacterized protein. (1237 aa)
	PRUPE_8G259200	Uncharacterized protein. (942 aa)
	PRUPE_8G252600	Uncharacterized protein. (80 aa)
	PRUPE_8G031600	Uncharacterized protein. (767 aa)
	ERS	Ethylene-responsive sensor. (644 aa)
	PRUPE_1G117000	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1119 aa)
	PRUPE_1G224300	Uncharacterized protein. (1037 aa)
	PRUPE_1G295600	HATPase_c domain-containing protein. (797 aa)
	PRUPE_1G347000	RING-type domain-containing protein. (4774 aa)
	PRUPE_1G363900	HATPase_c domain-containing protein. (815 aa)
	PRUPE_1G556000	Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway. (741 aa)
	PRUPE_2G301300	HATPase_c domain-containing protein. (703 aa)

Your Current Organism:

Prunus persica

NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PRUPE_1G117000	PRUPE_3G198200	M5Y944	M5WYN8	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.533
PRUPE_1G117000	PRUPE_6G302500	M5Y944	M5VYH0	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Uncharacterized protein.	0.538
PRUPE_1G224300	PRUPE_1G336400	M5Y895	A0A251R731	Uncharacterized protein.	Uncharacterized protein.	0.920
PRUPE_1G224300	PRUPE_3G201700	M5Y895	M5X039	Uncharacterized protein.	Uncharacterized protein.	0.926
PRUPE_1G295600	PRUPE_1G363900	M5XYH1	M5XMY9	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.923
PRUPE_1G295600	PRUPE_3G201400	M5XYH1	M5XAT5	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.924
PRUPE_1G336400	PRUPE_1G224300	A0A251R731	M5Y895	Uncharacterized protein.	Uncharacterized protein.	0.920
PRUPE_1G336400	PRUPE_3G201700	A0A251R731	M5X039	Uncharacterized protein.	Uncharacterized protein.	0.904
PRUPE_1G347000	PRUPE_1G363900	M5XVG6	M5XMY9	RING-type domain-containing protein.	HATPase_c domain-containing protein.	0.428
PRUPE_1G347000	PRUPE_2G017500	M5XVG6	A0A251Q9I7	RING-type domain-containing protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.413
PRUPE_1G347000	PRUPE_2G018500	M5XVG6	A0A251QCU7	RING-type domain-containing protein.	TOP4c domain-containing protein.	0.413
PRUPE_1G347000	PRUPE_7G033800	M5XVG6	M5W877	RING-type domain-containing protein.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.	0.413
PRUPE_1G363900	PRUPE_1G295600	M5XMY9	M5XYH1	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.923
PRUPE_1G363900	PRUPE_1G347000	M5XMY9	M5XVG6	HATPase_c domain-containing protein.	RING-type domain-containing protein.	0.428
PRUPE_1G363900	PRUPE_3G201400	M5XMY9	M5XAT5	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.923
PRUPE_1G555900	PRUPE_7G183500	A0A251RIB1	A0A251NDB3	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.992
PRUPE_1G555900	PRUPE_8G259200	A0A251RIB1	A0A251N3G4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.996
PRUPE_2G017500	PRUPE_1G347000	A0A251Q9I7	M5XVG6	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	RING-type domain-containing protein.	0.413
PRUPE_2G018500	PRUPE_1G347000	A0A251QCU7	M5XVG6	TOP4c domain-containing protein.	RING-type domain-containing protein.	0.413
PRUPE_2G301300	PRUPE_6G028600	M5XIS6	M5W887	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.900

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About