STRINGSTRING
PRUPE_4G165200 PRUPE_4G165200 PRUPE_7G218100 PRUPE_7G218100 PRUPE_8G209200 PRUPE_8G209200 PRUPE_8G075000 PRUPE_8G075000 PRUPE_4G102900 PRUPE_4G102900 PRUPE_2G130800 PRUPE_2G130800 PRUPE_1G522400 PRUPE_1G522400 PRUPE_1G165100 PRUPE_1G165100 PRUPE_1G507600 PRUPE_1G507600 PRUPE_1G186600 PRUPE_1G186600 PRUPE_1G056300 PRUPE_1G056300 PRUPE_1G539400 PRUPE_1G539400 PRUPE_1G507500 PRUPE_1G507500 PRUPE_2G232400 PRUPE_2G232400 PRUPE_1G136500 PRUPE_1G136500 PRUPE_1G159500 PRUPE_1G159500 PRUPE_1G298500 PRUPE_1G298500 PRUPE_1G322200 PRUPE_1G322200 PRUPE_1G445200 PRUPE_1G445200 rpoB rpoB PRUPE_8G013000 PRUPE_8G013000 PRUPE_8G200100 PRUPE_8G200100 PRUPE_2G130000 PRUPE_2G130000 PRUPE_6G209100 PRUPE_6G209100 PRUPE_6G327000 PRUPE_6G327000 PRUPE_6G341500 PRUPE_6G341500 PRUPE_7G057000 PRUPE_7G057000 PRUPE_6G002500 PRUPE_6G002500 PRUPE_7G057800 PRUPE_7G057800 PRUPE_3G077000 PRUPE_3G077000 PRUPE_3G049300 PRUPE_3G049300 PRUPE_3G165800 PRUPE_3G165800 PRUPE_2G261500 PRUPE_2G261500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRUPE_4G165200Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (452 aa)
PRUPE_7G218100Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (649 aa)
PRUPE_8G209200Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (575 aa)
PRUPE_8G075000Uncharacterized protein; Belongs to the heat shock protein 70 family. (678 aa)
PRUPE_4G102900Uncharacterized protein. (299 aa)
PRUPE_2G130800tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (801 aa)
PRUPE_1G522400AA_TRNA_LIGASE_II domain-containing protein. (520 aa)
PRUPE_1G165100Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (471 aa)
PRUPE_1G507600Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (560 aa)
PRUPE_1G186600Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1182 aa)
PRUPE_1G056300Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (578 aa)
PRUPE_1G539400Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (517 aa)
PRUPE_1G507500Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (565 aa)
PRUPE_2G232400Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (603 aa)
PRUPE_1G136500Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1092 aa)
PRUPE_1G159500tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (820 aa)
PRUPE_1G298500Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (621 aa)
PRUPE_1G322200Uncharacterized protein. (259 aa)
PRUPE_1G445200Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (415 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1070 aa)
PRUPE_8G013000Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (530 aa)
PRUPE_8G200100tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (618 aa)
PRUPE_2G130000tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (713 aa)
PRUPE_6G209100Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (517 aa)
PRUPE_6G327000AA_TRNA_LIGASE_II domain-containing protein. (447 aa)
PRUPE_6G341500Uncharacterized protein. (279 aa)
PRUPE_7G057000Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (400 aa)
PRUPE_6G002500Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (605 aa)
PRUPE_7G057800Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (400 aa)
PRUPE_3G077000Uncharacterized protein; Belongs to the heat shock protein 70 family. (677 aa)
PRUPE_3G049300Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (574 aa)
PRUPE_3G165800Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
PRUPE_2G261500Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (392 aa)
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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