(15 nodes) Glycoside hydrolase superfamily network (Halotalea alkalilenta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANF59042.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (883 aa)
	ANF59751.1	Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (719 aa)
	ANF58925.1	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)
	ANF56196.1	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
	ANF59489.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (745 aa)
	nagZ	beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (342 aa)
	ANF56187.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
	ANF56132.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (313 aa)
	ANF58718.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family. (121 aa)
	ANF59219.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (719 aa)
	ANF58853.1	Beta-glucosidase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (764 aa)
	ANF59775.1	Glycogen debranching enzyme; Catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (660 aa)
	ANF59044.1	Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa)
	glgB	1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (746 aa)
	ANF59043.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (695 aa)

Your Current Organism:

Halotalea alkalilenta

NCBI taxonomy Id: 376489
Other names: CECT 7134, DSM 17697, H. alkalilenta, Halotalea alkalilenta Ntougias et al. 2007, strain AW-7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANF56187.1	ANF56196.1	A5892_00840	A5892_00900	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
ANF56187.1	ANF58718.1	A5892_00840	A5892_15625	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.	0.412
ANF56187.1	ANF58853.1	A5892_00840	A5892_16415	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56187.1	ANF58925.1	A5892_00840	A5892_16830	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
ANF56187.1	ANF59043.1	A5892_00840	A5892_17540	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.923
ANF56187.1	ANF59044.1	A5892_00840	A5892_17545	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
ANF56187.1	ANF59219.1	A5892_00840	A5892_18580	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56187.1	ANF59489.1	A5892_00840	A5892_04460	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56187.1	ANF59751.1	A5892_00840	A5892_17525	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.463
ANF56187.1	ANF59775.1	A5892_00840	A5892_18545	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycogen debranching enzyme; Catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.471
ANF56196.1	ANF56187.1	A5892_00900	A5892_00840	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
ANF56196.1	ANF58853.1	A5892_00900	A5892_16415	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56196.1	ANF58925.1	A5892_00900	A5892_16830	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ANF56196.1	ANF59042.1	A5892_00900	A5892_17535	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
ANF56196.1	ANF59043.1	A5892_00900	A5892_17540	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.923
ANF56196.1	ANF59044.1	A5892_00900	A5892_17545	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.470
ANF56196.1	ANF59219.1	A5892_00900	A5892_18580	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56196.1	ANF59489.1	A5892_00900	A5892_04460	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.905
ANF56196.1	ANF59751.1	A5892_00900	A5892_17525	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.495
ANF56196.1	ANF59775.1	A5892_00900	A5892_18545	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycogen debranching enzyme; Catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.492