STRINGSTRING
Fjoh_0183 Fjoh_0183 Fjoh_0184 Fjoh_0184 Fjoh_0185 Fjoh_0185 Fjoh_1231 Fjoh_1231 Fjoh_2024 Fjoh_2024 Fjoh_2456 Fjoh_2456 Fjoh_2566 Fjoh_2566 Fjoh_2628 Fjoh_2628 Fjoh_3114 Fjoh_3114 Fjoh_3115 Fjoh_3115 Fjoh_4024 Fjoh_4024 Fjoh_4075 Fjoh_4075 Fjoh_4076 Fjoh_4076 Fjoh_4077 Fjoh_4077 Fjoh_4078 Fjoh_4078 Fjoh_4080 Fjoh_4080 Fjoh_4082 Fjoh_4082 Fjoh_4084 Fjoh_4084 Fjoh_4085 Fjoh_4085 Fjoh_4086 Fjoh_4086 Fjoh_4087 Fjoh_4087 Fjoh_4088 Fjoh_4088 Fjoh_4089 Fjoh_4089 Fjoh_4090 Fjoh_4090 Fjoh_4091 Fjoh_4091 Fjoh_4092 Fjoh_4092 Fjoh_4093 Fjoh_4093 Fjoh_4094 Fjoh_4094 Fjoh_4095 Fjoh_4095 Fjoh_4096 Fjoh_4096 Fjoh_4097 Fjoh_4097 Fjoh_4098 Fjoh_4098 Fjoh_4099 Fjoh_4099 Fjoh_4101 Fjoh_4101 Fjoh_4103 Fjoh_4103 Fjoh_4105 Fjoh_4105 Fjoh_4112 Fjoh_4112 Fjoh_4113 Fjoh_4113 Fjoh_4114 Fjoh_4114 Fjoh_4115 Fjoh_4115 Fjoh_4116 Fjoh_4116 Fjoh_4122 Fjoh_4122 Fjoh_4123 Fjoh_4123 Fjoh_4124 Fjoh_4124 Fjoh_4125 Fjoh_4125 Fjoh_4126 Fjoh_4126 Fjoh_4127 Fjoh_4127 Fjoh_4222 Fjoh_4222 Fjoh_4223 Fjoh_4223 Fjoh_4224 Fjoh_4224 Fjoh_4225 Fjoh_4225 Fjoh_4226 Fjoh_4226 Fjoh_4228 Fjoh_4228 Fjoh_4229 Fjoh_4229 Fjoh_4231 Fjoh_4231 Fjoh_4232 Fjoh_4232 Fjoh_4235 Fjoh_4235 Fjoh_4236 Fjoh_4236 Fjoh_4246 Fjoh_4246 Fjoh_4247 Fjoh_4247 Fjoh_4248 Fjoh_4248 Fjoh_4249 Fjoh_4249 Fjoh_4250 Fjoh_4250 Fjoh_4251 Fjoh_4251 Fjoh_4252 Fjoh_4252 Fjoh_4253 Fjoh_4253 Fjoh_4256 Fjoh_4256 Fjoh_4320 Fjoh_4320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fjoh_0183Fibronectin, type III domain protein; Predicted lipoprotein. (522 aa)
Fjoh_0184RagB/SusD domain protein; Predicted lipoprotein. (604 aa)
Fjoh_0185PFAM: TonB-dependent receptor; TonB-dependent receptor, plug. (1080 aa)
Fjoh_1231Candidate pectin or pectate lyase; Polysaccharide lyase family 1. (919 aa)
Fjoh_2024Candidate beta-glycosidase; PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family. (603 aa)
Fjoh_2456Related to pectin or pectate lyases. (919 aa)
Fjoh_2566Candidate pectin or pectate lyase; Predicted lipoprotein. (368 aa)
Fjoh_2628Pectate lyase-like protein; Related to pectate lyases; Polysaccharide lyase family 1; D5 module. (989 aa)
Fjoh_3114Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (479 aa)
Fjoh_3115Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (509 aa)
Fjoh_4024Hypothetical protein. (418 aa)
Fjoh_4075Candidate beta-glycosidase; Predicted lipoprotein; Belongs to the glycosyl hydrolase 2 family. (1175 aa)
Fjoh_4076Hypothetical protein. (917 aa)
Fjoh_4077PFAM: Xylose isomerase domain protein TIM barrel. (300 aa)
Fjoh_4078Predicted lipoprotein. (381 aa)
Fjoh_4080alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases. (916 aa)
Fjoh_4082Predicted lipoprotein. (522 aa)
Fjoh_4084Hypothetical protein. (472 aa)
Fjoh_4085alpha-L-rhamnosidase-like proteins; Related to alpha-L-rhamnosidases. (926 aa)
Fjoh_4086Hypothetical protein. (620 aa)
Fjoh_4087Candidate beta-D-glycosidase/alpha-L-glycosidase; Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. (305 aa)
Fjoh_4088Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (522 aa)
Fjoh_4089Hypothetical protein. (468 aa)
Fjoh_4090Hypothetical protein. (1061 aa)
Fjoh_4091Candidate pectin or pectate lyase; Polysaccharide lyase family 1. (568 aa)
Fjoh_4092Hypothetical protein. (222 aa)
Fjoh_4093Candidate pectin or pectate lyase; Polysaccharide lyase family 1. (570 aa)
Fjoh_4094RagB/SusD domain protein; Predicted lipoprotein. (666 aa)
Fjoh_4095PFAM: TonB-dependent receptor, plug. (1123 aa)
Fjoh_4096Candidate pectin methylesterase; PFAM: Pectinesterase. (328 aa)
Fjoh_4097PFAM: protein of unknown function DUF1680. (672 aa)
Fjoh_4098Related to pectin or pectate lyases. (819 aa)
Fjoh_4099Hypothetical protein. (794 aa)
Fjoh_4101alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases. (1129 aa)
Fjoh_4103Predicted lipoprotein. (374 aa)
Fjoh_4105alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases. (728 aa)
Fjoh_4112TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (526 aa)
Fjoh_4113PFAM: oxidoreductase domain protein; homoserine dehydrogenase, NAD-binding. (354 aa)
Fjoh_4114Hypothetical protein. (832 aa)
Fjoh_4115Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (560 aa)
Fjoh_4116TIGRFAM: pectate lyase. (396 aa)
Fjoh_4122ABC-type sugar transport system periplasmic component-like protein. (382 aa)
Fjoh_4123PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (380 aa)
Fjoh_4124PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (378 aa)
Fjoh_4125PFAM: extracellular solute-binding protein, family 1. (408 aa)
Fjoh_4126PFAM: oxidoreductase domain protein. (352 aa)
Fjoh_4127PFAM: MaoC domain protein dehydratase. (146 aa)
Fjoh_4222Candidate rhamnogalacturonan lyase; PFAM: FG-GAP repeat protein. (616 aa)
Fjoh_4223Hypothetical protein. (708 aa)
Fjoh_4224Hypothetical protein. (1136 aa)
Fjoh_4225Candidate beta-glycosidase; PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding. (951 aa)
Fjoh_4226Candidate rhamnogalacturonan acetylesterase; Carbohydrate esterase family 12 (two CE12 catalytic domains). (491 aa)
Fjoh_4228Candidate beta glycuronase; PFAM: glycoside hydrolase, family 28; Belongs to the glycosyl hydrolase 28 family. (442 aa)
Fjoh_4229Hypothetical protein. (429 aa)
Fjoh_4231Hypothetical protein. (368 aa)
Fjoh_4232Sialate O-acetylesterase; PFAM: protein of unknown function DUF303, acetylesterase putative. (511 aa)
Fjoh_4235alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases. (931 aa)
Fjoh_4236D-4,5-unsaturated beta-glycuronidase-like protein; Related to d-4,5-unsaturated beta-glycuronidases. (374 aa)
Fjoh_4246Candidate acetylxylan esterase; PFAM: lipolytic enzyme, G-D-S-L family. (218 aa)
Fjoh_4247Candidate polygalacturonase; PFAM: glycoside hydrolase, family 28; Belongs to the glycosyl hydrolase 28 family. (448 aa)
Fjoh_4248Candidate bifunctional pectin methylesterase/pectate lyase; TIGRFAM: pectate lyase; PFAM: Pectinesterase. (666 aa)
Fjoh_4249Candidate beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. (532 aa)
Fjoh_4250Candidate d-4,5-unsaturated beta-glycuronidase; Predicted lipoprotein. (397 aa)
Fjoh_4251Candidate d-4,5-unsaturated beta-glycuronidase; PFAM: glycosyl hydrolase, family 88. (401 aa)
Fjoh_4252Candidate d-4,5-unsaturated beta-glycuronidase; PFAM: glycosyl hydrolase, family 88. (399 aa)
Fjoh_4253Esterase/lipase-like protein. (318 aa)
Fjoh_4256Candidate polygalacturonase; Predicted lipoprotein; Belongs to the glycosyl hydrolase 28 family. (475 aa)
Fjoh_4320Transcriptional regulator, MarR family; PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR. (345 aa)
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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