STRINGSTRING
Fjoh_0183 Fjoh_0183 Fjoh_0184 Fjoh_0184 Fjoh_0185 Fjoh_0185 Fjoh_1231 Fjoh_1231 Fjoh_2566 Fjoh_2566 Fjoh_2628 Fjoh_2628 Fjoh_3114 Fjoh_3114 Fjoh_3115 Fjoh_3115 Fjoh_4088 Fjoh_4088 Fjoh_4096 Fjoh_4096 Fjoh_4115 Fjoh_4115 Fjoh_4116 Fjoh_4116 Fjoh_4222 Fjoh_4222 Fjoh_4223 Fjoh_4223 Fjoh_4224 Fjoh_4224 Fjoh_4225 Fjoh_4225 Fjoh_4226 Fjoh_4226 Fjoh_4228 Fjoh_4228 Fjoh_4235 Fjoh_4235 Fjoh_4236 Fjoh_4236 Fjoh_4246 Fjoh_4246 Fjoh_4247 Fjoh_4247 Fjoh_4248 Fjoh_4248 Fjoh_4249 Fjoh_4249 Fjoh_4250 Fjoh_4250 Fjoh_4251 Fjoh_4251 Fjoh_4252 Fjoh_4252 Fjoh_4253 Fjoh_4253 Fjoh_4256 Fjoh_4256
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fjoh_0183Fibronectin, type III domain protein; Predicted lipoprotein. (522 aa)
Fjoh_0184RagB/SusD domain protein; Predicted lipoprotein. (604 aa)
Fjoh_0185PFAM: TonB-dependent receptor; TonB-dependent receptor, plug. (1080 aa)
Fjoh_1231Candidate pectin or pectate lyase; Polysaccharide lyase family 1. (919 aa)
Fjoh_2566Candidate pectin or pectate lyase; Predicted lipoprotein. (368 aa)
Fjoh_2628Pectate lyase-like protein; Related to pectate lyases; Polysaccharide lyase family 1; D5 module. (989 aa)
Fjoh_3114Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (479 aa)
Fjoh_3115Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (509 aa)
Fjoh_4088Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (522 aa)
Fjoh_4096Candidate pectin methylesterase; PFAM: Pectinesterase. (328 aa)
Fjoh_4115Polygalacturonase-like protein; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family. (560 aa)
Fjoh_4116TIGRFAM: pectate lyase. (396 aa)
Fjoh_4222Candidate rhamnogalacturonan lyase; PFAM: FG-GAP repeat protein. (616 aa)
Fjoh_4223Hypothetical protein. (708 aa)
Fjoh_4224Hypothetical protein. (1136 aa)
Fjoh_4225Candidate beta-glycosidase; PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding. (951 aa)
Fjoh_4226Candidate rhamnogalacturonan acetylesterase; Carbohydrate esterase family 12 (two CE12 catalytic domains). (491 aa)
Fjoh_4228Candidate beta glycuronase; PFAM: glycoside hydrolase, family 28; Belongs to the glycosyl hydrolase 28 family. (442 aa)
Fjoh_4235alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases. (931 aa)
Fjoh_4236D-4,5-unsaturated beta-glycuronidase-like protein; Related to d-4,5-unsaturated beta-glycuronidases. (374 aa)
Fjoh_4246Candidate acetylxylan esterase; PFAM: lipolytic enzyme, G-D-S-L family. (218 aa)
Fjoh_4247Candidate polygalacturonase; PFAM: glycoside hydrolase, family 28; Belongs to the glycosyl hydrolase 28 family. (448 aa)
Fjoh_4248Candidate bifunctional pectin methylesterase/pectate lyase; TIGRFAM: pectate lyase; PFAM: Pectinesterase. (666 aa)
Fjoh_4249Candidate beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. (532 aa)
Fjoh_4250Candidate d-4,5-unsaturated beta-glycuronidase; Predicted lipoprotein. (397 aa)
Fjoh_4251Candidate d-4,5-unsaturated beta-glycuronidase; PFAM: glycosyl hydrolase, family 88. (401 aa)
Fjoh_4252Candidate d-4,5-unsaturated beta-glycuronidase; PFAM: glycosyl hydrolase, family 88. (399 aa)
Fjoh_4253Esterase/lipase-like protein. (318 aa)
Fjoh_4256Candidate polygalacturonase; Predicted lipoprotein; Belongs to the glycosyl hydrolase 28 family. (475 aa)
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.