STRINGSTRING
ubiD ubiD ACR12853.1 ACR12853.1 ACR13318.1 ACR13318.1 ACR13462.1 ACR13462.1 ACR10982.1 ACR10982.1 pepP pepP ubiH ubiH ubiF ubiF ACR14762.1 ACR14762.1 ACR14186.1 ACR14186.1 ACR13633.1 ACR13633.1 ACR13043.1 ACR13043.1 ACR12441.1 ACR12441.1 ACR11058.1 ACR11058.1 ubiX ubiX ACR14755.1 ACR14755.1 ACR12209.1 ACR12209.1 ACR13282.1 ACR13282.1 gph gph ubiG ubiG mtaD mtaD ACR14806.1 ACR14806.1 ACR11925.1 ACR11925.1 hflD hflD mnmA mnmA ACR12354.1 ACR12354.1 ACR13131.1 ACR13131.1 nudJ nudJ rluE rluE ACR14690.1 ACR14690.1 ACR11847.1 ACR11847.1 coq7 coq7 ubiE-2 ubiE-2 ACR12135.1 ACR12135.1 ACR11406.1 ACR11406.1 ubiE ubiE ACR14640.1 ACR14640.1 ubiB ubiB ACR13824.1 ACR13824.1 ACR11657.1 ACR11657.1 ubiA ubiA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. (486 aa)
ACR12853.15-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (185 aa)
ACR13318.1ZapA domain containing protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (95 aa)
ACR13462.1Conserved hypothetical protein; Identified by match to protein family HMM TIGR02449. (67 aa)
ACR10982.1Identified by match to protein family HMM PF03695; match to protein family HMM TIGR02292; Belongs to the UPF0149 family. (201 aa)
pepPXaa-Pro aminopeptidase; Identified by similarity to SP:P15034; match to protein family HMM PF00557; match to protein family HMM PF05195; Belongs to the peptidase M24B family. (443 aa)
ubiH2-polyprenyl-6-methoxyphenol 4-hydroxylase; Identified by match to protein family HMM PF01494; match to protein family HMM TIGR01984; match to protein family HMM TIGR01988. (427 aa)
ubiF2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR01988. (419 aa)
ACR14762.1Identified by match to protein family HMM PF04403; match to protein family HMM TIGR00155. (425 aa)
ACR14186.1Identified by match to protein family HMM PF02470. (536 aa)
ACR13633.1Putative lipoprotein; Identified by match to protein family HMM PF03886. (207 aa)
ACR13043.1Putative lipoprotein. (178 aa)
ACR12441.1Sel1 domain containing protein; Identified by match to protein family HMM PF08238; match to protein family HMM TIGR01352. (470 aa)
ACR11058.1Putative membrane protein. (288 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (209 aa)
ACR14755.1Metal dependent phosphohydrolase; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. (424 aa)
ACR12209.1Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01578. (262 aa)
ACR13282.1Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. (255 aa)
gphPhosphoglycolate phosphatase, bacterial; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. (220 aa)
ubiG3-demethylubiquinone-9 3-O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (257 aa)
mtaDChlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. (442 aa)
ACR14806.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (314 aa)
ACR11925.1Identified by match to protein family HMM PF08007. (385 aa)
hflDConserved hypothetical protein; Identified by similarity to OMNI:NTL01SF1101; match to protein family HMM PF04356. (207 aa)
mnmAtRNA U34 sulfurtransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (367 aa)
ACR12354.1Ubiquinone biosynthesis protein Coenzyme Q7 Coq7 family protein; Belongs to the COQ7 family. (169 aa)
ACR13131.1PsrA protein; Identified by match to protein family HMM PF00440. (215 aa)
nudJChain A, Nudix Hydrolase From Nitrosomonas Europaea; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. NudJ subfamily. (150 aa)
rluERibosomal large subunit pseudouridine synthase E; Identified by similarity to SP:P75966; match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. (206 aa)
ACR14690.1Conserved Hypothetical protein. (177 aa)
ACR11847.14a-hydroxytetrahydrobiopterin dehydratase; Identified by match to protein family HMM PF01329. (123 aa)
coq7Ubiquinone biosynthesis protein Coenzyme Q7 Coq7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. (213 aa)
ubiE-2SAM-dependent methyltransferase, UbiE family; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (275 aa)
ACR12135.1Sporulation and cell division repeat domain containing protein; Identified by match to protein family HMM PF05036. (194 aa)
ACR11406.1DnaJ domain protein; Identified by match to protein family HMM PF06155. (126 aa)
ubiEUbiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (249 aa)
ACR14640.1Conserved hypothetical protein. (212 aa)
ubiB2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. (545 aa)
ACR13824.1Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103. (564 aa)
ACR11657.1Conserved hypothetical protein; Identified by match to protein family HMM PF04357. (1197 aa)
ubiA4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (296 aa)
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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