(54 nodes) Mixed, incl. Dioxin degradation, and Xenobiotic metabolic process network (Teredinibacter turnerae T7901)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACR12908.1	Identified by match to protein family HMM PF00578; match to protein family HMM PF08534. (236 aa)
	ACR13571.1	Pirin domain protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF07883; Belongs to the pirin family. (232 aa)
	ACR13438.1	NADPH-dependent fmn reductase domain protein; Identified by match to protein family HMM PF03358. (195 aa)
	ACR12155.1	Oxalate:formate antiporter; Identified by match to protein family HMM PF07690. (459 aa)
	ACR13700.1	Conserved hypothetical protein; Identified by match to protein family HMM PF04828. (140 aa)
	ACR11402.1	Hypothetical protein; Identified by glimmer; putative. (37 aa)
	ACR11630.1	Hydratase/decarboxylase; Identified by similarity to SP:P77608; match to protein family HMM PF01689. (269 aa)
	ACR14176.1	Carbazole dioxygenase-like protein; Identified by match to protein family HMM PF00355. (390 aa)
	ACR11155.1	Identified by match to protein family HMM PF00561. (289 aa)
	ACR11501.1	Hypothetical protein; Identified by glimmer; putative. (91 aa)
	ACR11988.1	Aromatic ring-opening dioxygenase, catalytic LigB subunit family protein; Identified by match to protein family HMM PF02900. (271 aa)
	ACR12435.1	Hypothetical protein; Identified by glimmer; putative. (52 aa)
	ACR14340.1	Tannase and feruloyl esterase domain protein; Identified by match to protein family HMM PF07519. (527 aa)
	ACR11033.1	Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (419 aa)
	ACR13444.1	Identified by match to protein family HMM PF01925. (269 aa)
	ACR11967.2	Hypothetical protein; Identified by glimmer; putative. (48 aa)
	ACR12678.1	Putative ferredoxin subunit; Identified by match to protein family HMM PF00355. (117 aa)
	ACR10828.1	Cupin region; Identified by match to protein family HMM PF07883. (175 aa)
	ACR12368.1	FAD binding domain protein; Identified by match to protein family HMM PF01494. (407 aa)
	ACR14193.1	Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (302 aa)
	dmpG	4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (341 aa)
	ACR14325.1	Putative vanillate O-demethylase oxidoreductase; Ferredoxin-like protein; identified by similarity to SP:O54037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (322 aa)
	ACR14757.1	Hypothetical protein; Identified by glimmer; putative. (41 aa)
	ACR14720.1	Conserved hypothetical protein. (364 aa)
	ACR13032.1	Ring hydroxylating dioxygenase, alpha subunit; Identified by match to protein family HMM PF00355; match to protein family HMM PF00848. (402 aa)
	ACR13522.1	Ring hydroxylating dioxygenase, beta subunit; Identified by match to protein family HMM PF00866. (163 aa)
	ACR12437.1	Flavin-binding monooxygenase-like protein; Identified by match to protein family HMM PF00743. (629 aa)
	ACR13940.1	Putative membrane protein. (297 aa)
	ACR11600.1	Zn-dependent hydrolase, beta-lactamase family. (360 aa)
	ACR11875.1	Flavin reductase domain protein; Identified by match to protein family HMM PF01613. (164 aa)
	ACR13163.1	Conserved hypothetical protein. (237 aa)
	ACR13096.1	Oxidoreductase, FAD/FMN-binding; Identified by match to protein family HMM PF00724. (355 aa)
	ACR13524.1	Conserved hypothetical protein. (250 aa)
	ACR11301.1	Oxidoreuctase, zinc-binding alcohol dehydrogenase family protein; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02817; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (341 aa)
	ACR13086.1	Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. (410 aa)
	ACR14521.1	Conserved hypothetical protein. (191 aa)
	ACR13962.1	Hypothetical protein; Identified by glimmer; putative. (37 aa)
	ACR13321.1	Hypothetical protein; Identified by glimmer; putative. (90 aa)
	ACR12871.1	Conserved hypothetical protein; Identified by match to protein family HMM PF01118. (272 aa)
	ACR13160.1	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (285 aa)
	ACR12340.1	Transcriptional Regulator, TetR family; Identified by match to protein family HMM PF00440. (191 aa)
	map_2	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (259 aa)
	ACR11677.1	Conserved hypothetical protein. (68 aa)
	ACR14636.1	Conserved hypothetical protein. (149 aa)
	ACR13020.1	Mosc domain-containing protein; MOSC domain predicted to be sulfur carrier domain; identified by match to protein family HMM PF03473; match to protein family HMM PF03475. (233 aa)
	ACR12764.1	Conserved hypothetical protein. (75 aa)
	ACR13908.1	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (239 aa)
	ACR12841.1	Conserved hypothetical protein; Identified by match to protein family HMM PF03883; Belongs to the UPF0246 family. (256 aa)
	ACR13240.1	Conserved hypothetical protein. (163 aa)
	ACR13741.1	Peptidase, M48 family; Identified by match to protein family HMM PF00515; match to protein family HMM PF01435; match to protein family HMM PF07719. (429 aa)
	ACR12066.1	Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (400 aa)
	ACR14567.1	Putative transcriptional regulator; Identified by match to protein family HMM PF04299. (210 aa)
	ACR14093.1	Quinone oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. (330 aa)
	ACR14561.1	Identified by match to protein family HMM PF00296. (322 aa)

Your Current Organism:

Teredinibacter turnerae T7901

NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACR10828.1	ACR11033.1	TERTU_1280	TERTU_1266	Cupin region; Identified by match to protein family HMM PF07883.	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	0.563
ACR10828.1	ACR11155.1	TERTU_1280	TERTU_1260	Cupin region; Identified by match to protein family HMM PF07883.	Identified by match to protein family HMM PF00561.	0.509
ACR10828.1	ACR11630.1	TERTU_1280	TERTU_1258	Cupin region; Identified by match to protein family HMM PF07883.	Hydratase/decarboxylase; Identified by similarity to SP:P77608; match to protein family HMM PF01689.	0.425
ACR10828.1	ACR11988.1	TERTU_1280	TERTU_1262	Cupin region; Identified by match to protein family HMM PF07883.	Aromatic ring-opening dioxygenase, catalytic LigB subunit family protein; Identified by match to protein family HMM PF02900.	0.664
ACR10828.1	ACR12368.1	TERTU_1280	TERTU_1281	Cupin region; Identified by match to protein family HMM PF07883.	FAD binding domain protein; Identified by match to protein family HMM PF01494.	0.911
ACR10828.1	ACR13032.1	TERTU_1280	TERTU_1474	Cupin region; Identified by match to protein family HMM PF07883.	Ring hydroxylating dioxygenase, alpha subunit; Identified by match to protein family HMM PF00355; match to protein family HMM PF00848.	0.507
ACR10828.1	ACR14176.1	TERTU_1280	TERTU_1259	Cupin region; Identified by match to protein family HMM PF07883.	Carbazole dioxygenase-like protein; Identified by match to protein family HMM PF00355.	0.726
ACR10828.1	ACR14193.1	TERTU_1280	TERTU_1282	Cupin region; Identified by match to protein family HMM PF07883.	Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.	0.606
ACR10828.1	ACR14325.1	TERTU_1280	TERTU_1284	Cupin region; Identified by match to protein family HMM PF07883.	Putative vanillate O-demethylase oxidoreductase; Ferredoxin-like protein; identified by similarity to SP:O54037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.557
ACR10828.1	dmpG	TERTU_1280	TERTU_1283	Cupin region; Identified by match to protein family HMM PF07883.	4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.	0.540
ACR11033.1	ACR10828.1	TERTU_1266	TERTU_1280	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	Cupin region; Identified by match to protein family HMM PF07883.	0.563
ACR11033.1	ACR11988.1	TERTU_1266	TERTU_1262	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	Aromatic ring-opening dioxygenase, catalytic LigB subunit family protein; Identified by match to protein family HMM PF02900.	0.572
ACR11033.1	ACR12155.1	TERTU_1266	TERTU_0741	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	Oxalate:formate antiporter; Identified by match to protein family HMM PF07690.	0.573
ACR11033.1	ACR12368.1	TERTU_1266	TERTU_1281	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	FAD binding domain protein; Identified by match to protein family HMM PF01494.	0.451
ACR11033.1	ACR12841.1	TERTU_1266	TERTU_4575	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	Conserved hypothetical protein; Identified by match to protein family HMM PF03883; Belongs to the UPF0246 family.	0.806
ACR11033.1	ACR14340.1	TERTU_1266	TERTU_1264	Transporter, major facilitator family; Identified by match to protein family HMM PF07690.	Tannase and feruloyl esterase domain protein; Identified by match to protein family HMM PF07519.	0.589
ACR11155.1	ACR10828.1	TERTU_1260	TERTU_1280	Identified by match to protein family HMM PF00561.	Cupin region; Identified by match to protein family HMM PF07883.	0.509
ACR11155.1	ACR11501.1	TERTU_1260	TERTU_1261	Identified by match to protein family HMM PF00561.	Hypothetical protein; Identified by glimmer; putative.	0.976
ACR11155.1	ACR11630.1	TERTU_1260	TERTU_1258	Identified by match to protein family HMM PF00561.	Hydratase/decarboxylase; Identified by similarity to SP:P77608; match to protein family HMM PF01689.	0.992
ACR11155.1	ACR11988.1	TERTU_1260	TERTU_1262	Identified by match to protein family HMM PF00561.	Aromatic ring-opening dioxygenase, catalytic LigB subunit family protein; Identified by match to protein family HMM PF02900.	0.986