Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACR11129.1 | ACR11710.1 | TERTU_3686 | TERTU_3684 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.999 |
| ACR11129.1 | ACR11941.1 | TERTU_3686 | TERTU_3368 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Conserved hypothetical protein. | 0.470 |
| ACR11129.1 | ACR13668.1 | TERTU_3686 | TERTU_2523 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Succinate dehydrogenase / fumarate reductase family protein, iron-sulfur subunit; Identified by similarity to SP:P07014; match to protein family HMM TIGR00384. | 0.996 |
| ACR11129.1 | ACR14684.1 | TERTU_3686 | TERTU_3369 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Conserved hypothetical protein. | 0.484 |
| ACR11129.1 | acnB | TERTU_3686 | TERTU_1899 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Aconitate hydratase 2; Identified by match to protein family HMM PF00330; match to protein family HMM PF06434; match to protein family HMM TIGR00117; Belongs to the aconitase/IPM isomerase family. | 0.455 |
| ACR11129.1 | fumC | TERTU_3686 | TERTU_3095 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Putative fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.948 |
| ACR11129.1 | gltA | TERTU_3686 | TERTU_2529 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Citrate-synthase; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family. | 0.484 |
| ACR11129.1 | sdhC | TERTU_3686 | TERTU_2526 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.900 |
| ACR11129.1 | sdhD | TERTU_3686 | TERTU_2525 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.996 |
| ACR11129.1 | sucA | TERTU_3686 | TERTU_2522 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Oxoglutarate dehydrogenase (succinyl-transferring), E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239. | 0.809 |
| ACR11129.1 | sucC | TERTU_3686 | TERTU_2519 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | Putative succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.980 |
| ACR11129.1 | sucD | TERTU_3686 | TERTU_2518 | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | succinyl-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.976 |
| ACR11710.1 | ACR11129.1 | TERTU_3684 | TERTU_3686 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. | 0.999 |
| ACR11710.1 | ACR11941.1 | TERTU_3684 | TERTU_3368 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Conserved hypothetical protein. | 0.672 |
| ACR11710.1 | ACR13668.1 | TERTU_3684 | TERTU_2523 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Succinate dehydrogenase / fumarate reductase family protein, iron-sulfur subunit; Identified by similarity to SP:P07014; match to protein family HMM TIGR00384. | 0.921 |
| ACR11710.1 | ACR13927.1 | TERTU_3684 | TERTU_0352 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Putative L-lactate dehydrogenase; Identified by similarity to SP:P13714; match to protein family HMM PF00056; match to protein family HMM PF02866; Belongs to the LDH/MDH superfamily. | 0.567 |
| ACR11710.1 | ACR14684.1 | TERTU_3684 | TERTU_3369 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Conserved hypothetical protein. | 0.681 |
| ACR11710.1 | acnA | TERTU_3684 | TERTU_3094 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.736 |
| ACR11710.1 | acnB | TERTU_3684 | TERTU_1899 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Aconitate hydratase 2; Identified by match to protein family HMM PF00330; match to protein family HMM PF06434; match to protein family HMM TIGR00117; Belongs to the aconitase/IPM isomerase family. | 0.482 |
| ACR11710.1 | fumC | TERTU_3684 | TERTU_3095 | Fumarate reductase / succinate dehydrogenase family protein, iron-sulfur subunit; Identified by similarity to SP:P17596; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Putative fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.956 |
page 1 of 13