(11 nodes) Xylan catabolic process network (Teredinibacter turnerae T7901)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACR11162.1	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM TIGR01409. (379 aa)
	ACR11565.1	Xylanase; Identified by match to protein family HMM PF00331. (585 aa)
	ACR10884.1	Xylanase; Identified by match to protein family HMM PF00331. (445 aa)
	ACR10697.1	Xylanase; Identified by similarity to SP:P23030; match to protein family HMM PF00331; match to protein family HMM PF02018; match to protein family HMM PF03422. (955 aa)
	ACR12624.1	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family. (726 aa)
	ACR13552.1	Xylanase; Identified by match to protein family HMM PF00331. (411 aa)
	ACR14322.1	Xylanase; Identified by match to protein family HMM PF00331. (381 aa)
	ACR13391.1	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02018. (1149 aa)
	ACR13839.1	Glycoside hydrolase family 10 domain protein; Identified by match to protein family HMM PF00331. (397 aa)
	ACR11748.1	Acetylxylan esterase / xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02013; match to protein family HMM PF02839; match to protein family HMM PF03629. (952 aa)
	ACR11760.1	Putative lipoprotein. (426 aa)

Your Current Organism:

Teredinibacter turnerae T7901

NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACR10697.1	ACR12624.1	TERTU_1599	TERTU_2843	Xylanase; Identified by similarity to SP:P23030; match to protein family HMM PF00331; match to protein family HMM PF02018; match to protein family HMM PF03422.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.726
ACR10884.1	ACR12624.1	TERTU_0835	TERTU_2843	Xylanase; Identified by match to protein family HMM PF00331.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.694
ACR11162.1	ACR12624.1	TERTU_0736	TERTU_2843	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM TIGR01409.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.769
ACR11565.1	ACR13839.1	TERTU_0817	TERTU_4676	Xylanase; Identified by match to protein family HMM PF00331.	Glycoside hydrolase family 10 domain protein; Identified by match to protein family HMM PF00331.	0.701
ACR11565.1	ACR14322.1	TERTU_0817	TERTU_3398	Xylanase; Identified by match to protein family HMM PF00331.	Xylanase; Identified by match to protein family HMM PF00331.	0.648
ACR11748.1	ACR12624.1	TERTU_3603	TERTU_2843	Acetylxylan esterase / xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02013; match to protein family HMM PF02839; match to protein family HMM PF03629.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.708
ACR12624.1	ACR10697.1	TERTU_2843	TERTU_1599	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by similarity to SP:P23030; match to protein family HMM PF00331; match to protein family HMM PF02018; match to protein family HMM PF03422.	0.726
ACR12624.1	ACR10884.1	TERTU_2843	TERTU_0835	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by match to protein family HMM PF00331.	0.694
ACR12624.1	ACR11162.1	TERTU_2843	TERTU_0736	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM TIGR01409.	0.769
ACR12624.1	ACR11748.1	TERTU_2843	TERTU_3603	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Acetylxylan esterase / xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02013; match to protein family HMM PF02839; match to protein family HMM PF03629.	0.708
ACR12624.1	ACR13391.1	TERTU_2843	TERTU_0513	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02018.	0.534
ACR12624.1	ACR13552.1	TERTU_2843	TERTU_3349	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by match to protein family HMM PF00331.	0.698
ACR12624.1	ACR13839.1	TERTU_2843	TERTU_4676	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Glycoside hydrolase family 10 domain protein; Identified by match to protein family HMM PF00331.	0.705
ACR12624.1	ACR14322.1	TERTU_2843	TERTU_3398	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	Xylanase; Identified by match to protein family HMM PF00331.	0.779
ACR13391.1	ACR12624.1	TERTU_0513	TERTU_2843	Xylanase; Identified by match to protein family HMM PF00331; match to protein family HMM PF02018.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.534
ACR13552.1	ACR12624.1	TERTU_3349	TERTU_2843	Xylanase; Identified by match to protein family HMM PF00331.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.698
ACR13839.1	ACR11565.1	TERTU_4676	TERTU_0817	Glycoside hydrolase family 10 domain protein; Identified by match to protein family HMM PF00331.	Xylanase; Identified by match to protein family HMM PF00331.	0.701
ACR13839.1	ACR12624.1	TERTU_4676	TERTU_2843	Glycoside hydrolase family 10 domain protein; Identified by match to protein family HMM PF00331.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.705
ACR14322.1	ACR11565.1	TERTU_3398	TERTU_0817	Xylanase; Identified by match to protein family HMM PF00331.	Xylanase; Identified by match to protein family HMM PF00331.	0.648
ACR14322.1	ACR12624.1	TERTU_3398	TERTU_2843	Xylanase; Identified by match to protein family HMM PF00331.	Alpha-glucuronidase; Identified by similarity to GB:AAL57752.1; match to protein family HMM PF03648; match to protein family HMM PF07477; match to protein family HMM PF07488; Belongs to the glycosyl hydrolase 67 family.	0.779