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| | ACR11054.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF07793. (762 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family. (428 aa) |
| | fis | DNA-binding protein fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (103 aa) |
| | ACR13990.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF07793. (753 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (346 aa) |
| | ACR12446.1 | Conserved hypothetical protein. (215 aa) |
| | hda | DnaA regulatory inactivator Hda; Identified by match to protein family HMM PF00308; match to protein family HMM TIGR03420; Belongs to the DnaA family. HdA subfamily. (236 aa) |
| | dinG | ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. (704 aa) |
| | ACR13267.1 | Identified by match to protein family HMM PF01569. (170 aa) |
| | ACR12519.1 | Non-specific serine/threonine protein kinase; Identified by match to protein family HMM PF07228. (575 aa) |
| | hppA | V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (695 aa) |
| | ACR13731.1 | Transcriptional regulator; Identified by match to protein family HMM PF00440. (162 aa) |
| | ACR12607.1 | Conserved hypothetical protein. (1208 aa) |
| | phaC | poly(R)-hydroxyalkanoic acid synthase, class I; Identified by similarity to SP:P23608; match to protein family HMM PF00561; match to protein family HMM PF07167; match to protein family HMM TIGR01838. (616 aa) |
| | ACR14257.1 | Metallophosphoesterase; Identified by match to protein family HMM PF00149. (661 aa) |
| | ACR11569.1 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (106 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa) |
| | menF | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (462 aa) |
| | ACR11717.1 | Conserved hypothetical protein. (295 aa) |
| | ACR12340.1 | Transcriptional Regulator, TetR family; Identified by match to protein family HMM PF00440. (191 aa) |
| | ACR13160.1 | Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (285 aa) |
| | ACR14521.1 | Conserved hypothetical protein. (191 aa) |
| | pilF | Type IV pilus biogenesis/stability protein PilW; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM TIGR02521. (270 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (491 aa) |
| | ACR12658.1 | Glutamine cyclotransferase; Identified by similarity to GB:AAC27745.1; match to protein family HMM PF05096. (262 aa) |
| | tadA | Cytidine and deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (164 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (286 aa) |
| | ACR10970.1 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (159 aa) |
| | ACR11720.1 | Conserved hypothetical protein. (577 aa) |
| | ACR14578.1 | Oxidoreductase, 2OG-Fe(II) oxygenase family; Identified by match to protein family HMM PF03171. (207 aa) |
| | mrr | Mrr restriction system protein; Identified by match to protein family HMM PF04471. (303 aa) |
| | ACR13143.1 | TPR domain/sulfotransferase domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719. (526 aa) |
| | ACR12356.1 | Putative tyrosine beta-hydroxylase; alpha-Ketoglutarate-dependent oxygenase. Closest characterized homolog is emb|CAD91223.1 from bahlimycin biosynthesis and relatives from vancomycin biosynthetic pathways that have been shown to hydroxylate tyrosine in the beta position (PMID: 16499611). (531 aa) |
| | ACR11139.1 | Tryptophan halogenase; Identified by match to protein family HMM PF04820. (518 aa) |
| | ACR10999.1 | stearoyl-CoA 9-desaturase; Identified by match to protein family HMM PF00487. (339 aa) |
| | ACR12994.1 | stearoyl-CoA 9-desaturase; Identified by match to protein family HMM PF00487. (302 aa) |
| | ACR12257.1 | Cupin 2, conserved barrel domain protein; Identified by match to protein family HMM PF07883. (132 aa) |
| | ACR11322.1 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (208 aa) |
| | ACR13764.1 | Conserved hypothetical protein. (802 aa) |
| | nnrU | NnrU protein; Identified by match to protein family HMM PF07298. (188 aa) |
| | etfA | Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. (309 aa) |
| | etfB | Electron transfer flavoprotein, beta subunit; Identified by match to protein family HMM PF01012. (250 aa) |
| | ACR10913.1 | Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (548 aa) |
| | ACR13078.1 | NAD(+) diphosphatase; Identified by match to protein family HMM PF00293; match to protein family HMM PF09297. (262 aa) |
| | dnaQ | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (239 aa) |
| | rnhA | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (147 aa) |
| | ACR11926.1 | HAD hydrolase domain protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. (201 aa) |
| | ACR11245.1 | Transcriptional regulator, TetR family. (184 aa) |
| | ACR13706.1 | Glutathione S-transferase; Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily. (317 aa) |
| | ACR14107.1 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440; match to protein family HMM PF08362. (243 aa) |
| | xdhA | Xanthine dehydrogenase, small subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450; match to protein family HMM TIGR02963. (484 aa) |
| | uraD | Ohcu decarboxylase; Identified by match to protein family HMM PF09349; match to protein family HMM TIGR03180. (163 aa) |
| | ACR14235.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF04828. (140 aa) |
| | ACR14014.1 | Amidase, hydantoinase/carbamoylase family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879. (418 aa) |
| | ACR13272.1 | Purine catabolism protein PucG; Identified by match to protein family HMM PF00266. (408 aa) |
| | ACR10887.1 | Conserved hypothetical protein. (253 aa) |
| | ACR14161.1 | Carbohydrate esterase family 4 domain protein; Identified by match to protein family HMM PF01522; match to protein family HMM TIGR03212. (327 aa) |
| | ACR13995.1 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. (447 aa) |
| | ACR11600.1 | Zn-dependent hydrolase, beta-lactamase family. (360 aa) |
| | ACR13358.1 | Phospholipase, patatin family; Identified by match to protein family HMM PF01734. (381 aa) |
| | ACR13392.1 | acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. (594 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1166 aa) |
| | ACR11520.1 | Putative presequence protease; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; match to protein family HMM PF08367. (973 aa) |
| | ACR14806.1 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (314 aa) |
| | rpmF | Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family. (60 aa) |
| | ACR11405.1 | Protein kinase. (315 aa) |
| | ACR13860.1 | Protein kinase; Identified by match to protein family HMM PF00069. (597 aa) |
| | ACR12444.1 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (182 aa) |
| | ACR13101.2 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa) |
| | ACR14795.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF01370; match to protein family HMM PF08338; match to protein family HMM TIGR01777. (308 aa) |
| | ACR11533.1 | Putative Sigma 54 modulation protein/ribosomal protein S30EA. (105 aa) |
| | speA | Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (639 aa) |
| | nspC | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (395 aa) |
| | ACR11627.1 | Conserved hypothetical protein. (273 aa) |
| | ACR12701.1 | Rhodanese/ankyrin domain protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. (254 aa) |
| | ACR14672.1 | Conserved hypothetical protein. (109 aa) |
| | ACR10740.1 | Putative alkylated DNA repair protein. (211 aa) |
| | ACR14590.1 | Putative peptidase S16, lon domain protein. (216 aa) |
| | nifH | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (292 aa) |
| | rnfC | Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (505 aa) |
| | ACR14720.1 | Conserved hypothetical protein. (364 aa) |
| | ACR13535.1 | Conserved hypothetical protein. (377 aa) |
| | ihfA | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (107 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | ihfB | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (98 aa) |
| | rpsA | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (560 aa) |
| | ACR10960.1 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (377 aa) |
| | ACR11077.1 | Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. (573 aa) |
| | ACR12456.1 | N-acylneuraminate-9-phosphate synthase; Identified by match to protein family HMM PF03102; match to protein family HMM PF08666. (333 aa) |
| | ACR11155.1 | Identified by match to protein family HMM PF00561. (289 aa) |
| | ACR10725.1 | Identified by match to protein family HMM PF01636. (250 aa) |
| | ACR13700.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF04828. (140 aa) |
| | ACR13251.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. (563 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (236 aa) |
| | ACR13014.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF03937. (107 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (118 aa) |
| | rpsP | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. (81 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (552 aa) |
| | ACS93584.1 | Conserved hypothetical protein. (442 aa) |
| | ACR13873.1 | Identified by match to protein family HMM PF01154. (535 aa) |
| | ACR12724.1 | hydroxymethylglutaryl-CoA reductase, degradative; Identified by match to protein family HMM TIGR00532; Belongs to the HMG-CoA reductase family. (432 aa) |
| | ACR13964.1 | Identified by similarity to OMNI:AFE_0970; match to protein family HMM PF00494. (375 aa) |
| | shc | Squalene-hopene cyclase; Identified by similarity to SP:P33247; match to protein family HMM PF00432; match to protein family HMM TIGR01507; match to protein family HMM TIGR01787. (671 aa) |
| | ACR10851.1 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (457 aa) |
| | nusA | Transcription elongation / termination protein, N utilization substance A; Participates in both transcription termination and antitermination. (496 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (940 aa) |
| | rpsO | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | ACR13351.1 | Putative HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. (190 aa) |
| | ACR10681.1 | Senescence marker protein-30; Identified by match to protein family HMM PF08450. (290 aa) |
| | ACR14724.1 | phosphoribulokinase/Uridine kinase Family Protein. (313 aa) |
| | rpsU | Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | folK_2 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498. (162 aa) |
| | apaG | ApaG protein; Identified by match to protein family HMM PF04379. (131 aa) |
| | ACR13048.1 | Name changed from aminoglycoside phosphotransferase to Phosphotransferase enzyme family; identified by match to protein family HMM PF01636. (364 aa) |
| | ACR14369.1 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (146 aa) |
| | ACR12052.1 | Putative CheA signal transduction histidine kinase. (346 aa) |
| | ACS93532.1 | Chitinase; Identified by match to protein family HMM PF00704; match to protein family HMM PF00801; match to protein family HMM PF02839. (608 aa) |
| | eutC | Ethanolamine ammonia-lyase, light chain; Identified by similarity to SP:P19265; match to protein family HMM PF05985; Belongs to the EutC family. (272 aa) |
| | eutB | Ethanolamine ammonia-lyase, large subunit; Identified by similarity to SP:P19264; match to protein family HMM PF06751. (527 aa) |
| | ACR13571.1 | Pirin domain protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF07883; Belongs to the pirin family. (232 aa) |
| | ACR12003.1 | ADP-ribosylation/Crystallin J1; Identified by match to protein family HMM PF03747. (307 aa) |
| | ACR14237.1 | Conserved hypothetical protein. (261 aa) |
| | ACR13460.1 | Putative PAS/PAC sensor protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (457 aa) |
| | argA | Amino-acid N-acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM PF00696; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family. ArgA subfamily. (441 aa) |
| | ACR14689.1 | Putative nicotinate-nucleotide adenylyltransferase; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; Belongs to the NadD family. (184 aa) |
| | ACR12894.1 | Conserved hypothetical protein. (278 aa) |
| | ACR12042.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF02582. (263 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (640 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (351 aa) |
| | ACR11697.1 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. (591 aa) |
| | ACR14565.1 | Tryptophan halogenase PrnA; Identified by match to protein family HMM PF01266; match to protein family HMM PF04820. (492 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (151 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (149 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (442 aa) |
| | ACR11062.1 | Identified by match to protein family HMM PF01712. (228 aa) |
| | folK_1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498. (160 aa) |
| | ubiX | Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (209 aa) |
| | ACR10937.1 | Acetyltransferase, GNAT family; Identified by similarity to SP:Q7PCJ8; match to protein family HMM PF00583. (177 aa) |
| | ACR14508.1 | Glutathione-dependent formaldehyde-activating, GFA. (44 aa) |
| | recQ | ATP-dependent DNA helicase RecQ; Identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389. (601 aa) |
| | ACR11114.1 | Chromosome 3 open reading frame 37; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. (228 aa) |
| | ACR13075.1 | Conserved hypothetical protein. (279 aa) |
| | ACR11287.1 | Hypothetical protein; Identified by glimmer; putative. (292 aa) |
| | ACS93534.1 | Glutamate synthase; Identified by match to protein family HMM PF01645; Belongs to the glutamate synthase family. (414 aa) |
| | ACS93535.1 | Glutamate synthase domain 2. (90 aa) |
| | ACR11813.1 | Conserved hypothetical protein. (390 aa) |
| | ACR12664.1 | Hypothetical protein; Identified by glimmer; putative. (491 aa) |
| | ACR12219.1 | Putative membrane protein. (354 aa) |
| | bph | DNA-binding protein BpH2; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. (147 aa) |
| | nusG | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. (177 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (176 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (126 aa) |
| | rpsL | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (123 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (214 aa) |
| | rplD | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (204 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplV | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (110 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (224 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpmC | Ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family. (64 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (88 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (105 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (116 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (170 aa) |
| | rpmD | Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308. (61 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpsM | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (130 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | rplQ | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. (131 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | rpmA | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa) |
| | ACR14715.1 | Identified by match to protein family HMM PF00753. (254 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (217 aa) |
| | ACR10666.1 | Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. (306 aa) |
| | rpsB | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. (250 aa) |
| | ACR13015.1 | Peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. (973 aa) |
| | ACR10758.1 | Conserved hypothetical protein. (136 aa) |
| | ACR13562.1 | Putative membrane protein. (467 aa) |
| | ribF | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family. (315 aa) |
| | ACR12417.1 | Conserved hypothetical protein. (154 aa) |
| | ACR13144.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. (406 aa) |
| | ACR12355.1 | Hypothetical protein; Identified by glimmer; putative. (650 aa) |
| | ACR12974.1 | Conserved hypothetical protein. (311 aa) |
| | ACR14767.1 | Esterase/lipase/thioesterase family catalytic domain protein. (221 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (593 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (378 aa) |
| | ACR11621.1 | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. (235 aa) |
| | ACR12294.1 | Cytochrome c oxidase assembly protein CtaG / Cox11; Identified by similarity to SP:P56940; match to protein family HMM PF04442. (206 aa) |
| | ACR13230.1 | Conserved hypothetical protein. (243 aa) |
| | ACR12910.1 | Putative cytochrome oxidase assembly protein. (423 aa) |
| | ACR11746.1 | Ggdef; Identified by match to protein family HMM PF02630. (221 aa) |
| | ACR10869.1 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03445. (628 aa) |
| | ACR13812.1 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (199 aa) |
| | ACR14021.1 | Integral membrane protein. (191 aa) |
| | ACR12269.1 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. (446 aa) |
| | ACR12222.1 | Conserved hypothetical protein. (190 aa) |
| | ACR13880.1 | Pirin; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family. (282 aa) |
| | rpmG | Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family. (51 aa) |
| | rpmB | Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | radC | DNA repair protein RadC; Identified by similarity to SP:P25531; match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family. (224 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (308 aa) |
| | slmA | Transcriptional regulator, TetR family; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (197 aa) |
| | ACR12943.1 | Putative peptidase domain protein. (1022 aa) |
| | ACR13918.1 | Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. (185 aa) |
| | ACR13437.1 | Integral membrane protein, DUF6; Identified by match to protein family HMM PF00892. (284 aa) |
| | ACR12996.1 | Heat shock protein Hsp20; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. (188 aa) |
| | rapA | RNA polymerase-associated protein RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. (879 aa) |
| | ACR12046.1 | Thioesterase family protein; Identified by similarity to SP:P0A8Z0; match to protein family HMM PF03061. (131 aa) |
| | ACR14206.1 | DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. (93 aa) |
| | ACR11940.1 | Oxidoreductase, 2OG-Fe(II) oxygenase family; Identified by match to protein family HMM PF03171. (224 aa) |
| | ACR13046.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF08818. (189 aa) |
| | ACR13388.1 | Sulfotransferase; Identified by match to protein family HMM PF00685. (306 aa) |
| | ACR11144.1 | Putative N-deacetylase/N-sulfotransferase; Identified by match to protein family HMM PF00685. (281 aa) |
| | ACR12722.1 | Putative sulfotransferase; Identified by match to protein family HMM PF00685. (327 aa) |
| | ACR11686.1 | Small GTP-binding protein; Identified by match to protein family HMM PF03029; match to protein family HMM TIGR00231. (178 aa) |
| | ACR12577.1 | Name was changed to acetyltransferase, GNAT family from histone acetyltransferase HPA2 and related acetyltransferases, putative; identified by match to protein family HMM PF00583. (135 aa) |
| | ACR10910.1 | MarR-family transcriptional regulator; Identified by match to protein family HMM PF00583. (158 aa) |
| | ACR11443.1 | Hypothetical protein; Identified by glimmer; putative. (673 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (366 aa) |
| | ACR12531.1 | Putative membrane protein; Identified by match to protein family HMM PF02706. (527 aa) |
| | ACR11578.1 | Sulfotransferase domain protein; Identified by match to protein family HMM PF00685. (294 aa) |
| | ACR12082.1 | Hypothetical protein; Identified by glimmer; putative. (890 aa) |
| | ACR13080.1 | Putative membrane protein. (537 aa) |
| | ACR14733.1 | Oxidoreductase, short chain dehydrogenase / reductase family; Identified by match to protein family HMM PF00106. (248 aa) |
| | ACR13670.1 | Formamidase; Identified by match to protein family HMM PF03069. (410 aa) |
| | ACR10698.1 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (180 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (421 aa) |
| | ogt | methylated-DNA-protein-cysteine methyltransferase; Identified by match to protein family HMM PF01035. (120 aa) |
| | ACR12554.1 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (184 aa) |
| | selO | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (485 aa) |
| | ACR12436.1 | Non-specific serine/threonine protein kinase; Identified by match to protein family HMM PF00069. (572 aa) |
| | ACR13076.1 | Integrase core domain protein; Identified by match to protein family HMM PF00665. (874 aa) |
| | ACR13541.1 | Conserved hypothetical protein. (360 aa) |
| | ACR14046.1 | Helicase domain protein; Identified by match to protein family HMM PF00271. (1149 aa) |
| | ACR11389.1 | Hypothetical protein; Identified by glimmer; putative. (50 aa) |
| | ACR14121.1 | Hypothetical protein; Identified by glimmer; putative. (1297 aa) |
| | dhbC | Isochorismate synthase DhbC; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543. (394 aa) |
| | ACR13863.1 | Transcriptional regulator of TetR family protein; Identified by match to protein family HMM PF00440. (198 aa) |
| | ACR11666.1 | Conserved hypothetical protein. (578 aa) |
| | ACR11961.1 | Conserved hypothetical protein. (71 aa) |
| | ACR13601.1 | Putative amidohydrolase/hippurate hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891. (403 aa) |
| | ACR12877.1 | Cytosine deaminase; Identified by match to protein family HMM PF00383. (153 aa) |
| | ACR13257.1 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (155 aa) |
| | ACR11227.1 | Conserved hypothetical protein TIGR03440; Identified by match to protein family HMM PF03781; match to protein family HMM TIGR03440. (443 aa) |
| | ACR14750.1 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. (210 aa) |
| | ACR12593.1 | Identified by match to protein family HMM PF00561. (396 aa) |
| | ACR12900.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. (134 aa) |
| | ACR11606.1 | Fe-S cluster ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (592 aa) |
| | ybeY | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (155 aa) |
| | ACR12845.1 | Cupin domain protein; Identified by match to protein family HMM PF07883. (128 aa) |
| | ACR12680.1 | Hypothetical acetyltransferase; Identified by match to protein family HMM PF00583. (131 aa) |
| | ACR12205.1 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (149 aa) |
| | ychF | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa) |
| | rplY | Ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (209 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (415 aa) |
| | mreB | Rod shape-determining protein MreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904. (343 aa) |
| | ACR14532.1 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. (302 aa) |
| | mgtE | Magnesium transporter; Acts as a magnesium transporter. (454 aa) |
| | ACR13057.1 | Ssoprenylcysteine carboxyl methyltransferase family protein; Identified by match to protein family HMM PF04140. (150 aa) |
| | ACR12215.1 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (116 aa) |
| | ACR11551.1 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (225 aa) |
| | ACR13033.1 | Hypothetical protein; Identified by glimmer; putative. (1133 aa) |
| | ACR14331.1 | Conserved hypothetical protein. (358 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rpsI | Ribosomal protein S9; Identified by similarity to GB:ABK07433.1; match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | sspB | Stringent starvation protein B, hypothetical; Identified by match to protein family HMM PF04386. (131 aa) |
| | ACR13300.1 | Divalent cation transporter; Identified by match to protein family HMM PF04011. (251 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (739 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA. (69 aa) |
| | ACR14412.1 | Identified by match to protein family HMM PF03061. (186 aa) |
| | raiA | Ribosomal subunit interface protein; Identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741. (103 aa) |
| | ACR10738.1 | Amine oxidase family, flavin-containing protein; Identified by match to protein family HMM PF01593. (380 aa) |
| | ACR13780.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF04828. (138 aa) |
| | ACR10839.1 | Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. (251 aa) |
| | ACR13349.1 | Conserved hypothetical protein. (802 aa) |
| | ACR11614.1 | Conserved hypothetical protein. (311 aa) |
| | ACR13140.1 | Small GTP-binding protein; Identified by match to protein family HMM PF03029. (175 aa) |
| | ACR10936.1 | TPR protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (291 aa) |
| | ACR11941.1 | Conserved hypothetical protein. (275 aa) |
| | ACR12440.1 | Putative membrane protein. (290 aa) |
| | ACR12167.1 | Glutathione S-transferase. (315 aa) |
| | cobN | CobN/magnesium chelatase; Identified by match to protein family HMM PF02514. (1483 aa) |
| | ACR11255.1 | Hypothetical protein; Identified by glimmer; putative. (446 aa) |
