Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACR11229.1 | ACR11954.1 | TERTU_0028 | TERTU_0640 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | 0.925 |
| ACR11229.1 | ACR12350.1 | TERTU_0028 | TERTU_3816 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | Arabinose 5-phosphate isomerase; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393. | 0.543 |
| ACR11229.1 | ACR12973.1 | TERTU_0028 | TERTU_3964 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.958 |
| ACR11229.1 | ACR14134.1 | TERTU_0028 | TERTU_0700 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | Lipopolysaccharide heptosyltransferase; Glycosyltransferase family 9 (GT9) domain in CAZy; identified by similarity to SP:P24173; match to protein family HMM PF01075. | 0.447 |
| ACR11229.1 | kdsA | TERTU_0028 | TERTU_2850 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | 3-deoxy-8-phosphooctulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01362; Belongs to the KdsA family. | 0.427 |
| ACR11229.1 | kdsB | TERTU_0028 | TERTU_2463 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.466 |
| ACR11229.1 | lpxA | TERTU_0028 | TERTU_1016 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.434 |
| ACR11229.1 | lpxB | TERTU_0028 | TERTU_1017 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.692 |
| ACR11229.1 | lpxC | TERTU_0028 | TERTU_3043 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.542 |
| ACR11229.1 | lpxD | TERTU_0028 | TERTU_1014 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.553 |
| ACR11229.1 | lpxK | TERTU_0028 | TERTU_2464 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.630 |
| ACR11229.1 | lpxL | TERTU_0028 | TERTU_0697 | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.926 |
| ACR11954.1 | ACR11229.1 | TERTU_0640 | TERTU_0028 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279. | 0.925 |
| ACR11954.1 | ACR12350.1 | TERTU_0640 | TERTU_3816 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | Arabinose 5-phosphate isomerase; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393. | 0.531 |
| ACR11954.1 | ACR12973.1 | TERTU_0640 | TERTU_3964 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.955 |
| ACR11954.1 | ACR14134.1 | TERTU_0640 | TERTU_0700 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | Lipopolysaccharide heptosyltransferase; Glycosyltransferase family 9 (GT9) domain in CAZy; identified by similarity to SP:P24173; match to protein family HMM PF01075. | 0.498 |
| ACR11954.1 | lpxA | TERTU_0640 | TERTU_1016 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.451 |
| ACR11954.1 | lpxB | TERTU_0640 | TERTU_1017 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.709 |
| ACR11954.1 | lpxC | TERTU_0640 | TERTU_3043 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.510 |
| ACR11954.1 | lpxD | TERTU_0640 | TERTU_1014 | Lipid A biosynthesis lauroyl; Identified by match to protein family HMM PF03279. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.555 |
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