(52 nodes) Mostly uncharacterized, incl. Immunoglobulin-like fold, and Polysaccharide lyase network (Stigmatella aurantiaca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADO67817.1	Conserved uncharacterized protein. (268 aa)
	ADO67881.1	Tenascin-X. (723 aa)
	ADO68211.1	Conserved uncharacterized protein. (227 aa)
	ADO68260.1	Uncharacterized protein. (1803 aa)
	ADO68572.1	SEC-C motif domain protein. (426 aa)
	ADO68656.1	Conserved uncharacterized protein. (407 aa)
	ADO68775.1	Conserved uncharacterized protein. (587 aa)
	ADO69018.1	Ribosomal protein alanine N-acetyl transferase-like protein. (177 aa)
	ADO69535.1	Tetratricopeptide repeat domain protein. (508 aa)
	ADO69703.1	Conserved uncharacterized protein. (281 aa)
	ADO69874.1	Peptidase, M48 family. (616 aa)
	ADO70007.1	Conserved uncharacterized protein. (502 aa)
	ADO70028.1	Uncharacterized protein. (1316 aa)
	ADO70092.1	Thioesterase family protein. (156 aa)
	ADO70124.1	LysM domain protein, Peptidoglycan-binding protein. (240 aa)
	ADO70550.1	B12 binding domain protein. (571 aa)
	ADO70623.1	Phage recombination protein Bet. (345 aa)
	ADO70703.1	Conserved uncharacterized protein. (200 aa)
	ADO70755.1	Conserved uncharacterized protein. (212 aa)
	ADO70940.1	Conserved uncharacterized protein. (402 aa)
	ADO71126.1	Conserved uncharacterized protein. (831 aa)
	ADO71159.1	Conserved uncharacterized protein. (523 aa)
	ADO71193.1	Conserved uncharacterized protein. (521 aa)
	ADO71491.1	Conserved uncharacterized protein. (343 aa)
	ADO71561.1	Conserved uncharacterized protein. (314 aa)
	ADO71725.1	Metallo-beta-lactamase superfamily protein. (516 aa)
	ADO71781.1	Uncharacterized protein. (624 aa)
	ADO72194.1	Uncharacterized protein. (549 aa)
	ADO72327.1	Conserved uncharacterized protein. (217 aa)
	ADO72331.1	Uncharacterized protein. (550 aa)
	ADO72534.1	Conserved uncharacterized protein. (990 aa)
	ADO72574.1	Conserved uncharacterized protein. (1192 aa)
	ADO72815.1	Conserved uncharacterized protein. (552 aa)
	ADO72976.1	Conserved uncharacterized protein. (1177 aa)
	ADO73414.1	Conserved uncharacterized protein. (622 aa)
	ADO73463.1	Conserved uncharacterized protein. (621 aa)
	ADO73598.1	Uncharacterized protein. (1609 aa)
	ADO73711.1	Conserved uncharacterized protein. (530 aa)
	ADO73933.1	Conserved uncharacterized protein. (360 aa)
	ADO74120.1	Conserved uncharacterized protein. (269 aa)
	ADO74121.1	Conserved uncharacterized protein. (395 aa)
	ADO74271.1	Conserved uncharacterized protein. (266 aa)
	ADO74300.1	Conserved uncharacterized protein. (456 aa)
	ADO74335.1	Conserved uncharacterized protein. (486 aa)
	ADO74414.1	Conserved uncharacterized protein. (997 aa)
	ADO74812.1	Conserved uncharacterized protein. (346 aa)
	ADO74908.1	Tetratricopeptide repeat protein. (3177 aa)
	ADO74918.1	Conserved uncharacterized protein. (1764 aa)
	ADO74960.1	Conserved uncharacterized protein. (347 aa)
	ADO74964.1	Conserved uncharacterized protein. (709 aa)
	ADO75282.1	Conserved uncharacterized protein. (258 aa)
	ADO75951.1	Conserved uncharacterized protein. (869 aa)

Your Current Organism:

Stigmatella aurantiaca

NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADO67817.1	ADO67881.1	STAUR_0008	STAUR_0072	Conserved uncharacterized protein.	Tenascin-X.	0.774
ADO67817.1	ADO68211.1	STAUR_0008	STAUR_0402	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.758
ADO67817.1	ADO68260.1	STAUR_0008	STAUR_0451	Conserved uncharacterized protein.	Uncharacterized protein.	0.745
ADO67817.1	ADO68572.1	STAUR_0008	STAUR_0768	Conserved uncharacterized protein.	SEC-C motif domain protein.	0.770
ADO67817.1	ADO68656.1	STAUR_0008	STAUR_0852	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.752
ADO67817.1	ADO68775.1	STAUR_0008	STAUR_0971	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.745
ADO67817.1	ADO69018.1	STAUR_0008	STAUR_1214	Conserved uncharacterized protein.	Ribosomal protein alanine N-acetyl transferase-like protein.	0.766
ADO67817.1	ADO69535.1	STAUR_0008	STAUR_1731	Conserved uncharacterized protein.	Tetratricopeptide repeat domain protein.	0.767
ADO67817.1	ADO69703.1	STAUR_0008	STAUR_1899	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.667
ADO67817.1	ADO69874.1	STAUR_0008	STAUR_2070	Conserved uncharacterized protein.	Peptidase, M48 family.	0.761
ADO67817.1	ADO70007.1	STAUR_0008	STAUR_2203	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.754
ADO67817.1	ADO70028.1	STAUR_0008	STAUR_2224	Conserved uncharacterized protein.	Uncharacterized protein.	0.774
ADO67817.1	ADO70092.1	STAUR_0008	STAUR_2288	Conserved uncharacterized protein.	Thioesterase family protein.	0.753
ADO67817.1	ADO70124.1	STAUR_0008	STAUR_2320	Conserved uncharacterized protein.	LysM domain protein, Peptidoglycan-binding protein.	0.771
ADO67817.1	ADO70550.1	STAUR_0008	STAUR_2752	Conserved uncharacterized protein.	B12 binding domain protein.	0.772
ADO67817.1	ADO70623.1	STAUR_0008	STAUR_2829	Conserved uncharacterized protein.	Phage recombination protein Bet.	0.764
ADO67817.1	ADO70703.1	STAUR_0008	STAUR_2911	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.714
ADO67817.1	ADO70755.1	STAUR_0008	STAUR_2963	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.721
ADO67817.1	ADO70940.1	STAUR_0008	STAUR_3148	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.773
ADO67817.1	ADO71126.1	STAUR_0008	STAUR_3334	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.771

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