(13 nodes) Mostly uncharacterized, incl. Collagen binding, and Pentapeptide repeat network (Stigmatella aurantiaca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADO67817.1	Conserved uncharacterized protein. (268 aa)
	ADO67881.1	Tenascin-X. (723 aa)
	ADO68572.1	SEC-C motif domain protein. (426 aa)
	ADO70124.1	LysM domain protein, Peptidoglycan-binding protein. (240 aa)
	ADO72331.1	Uncharacterized protein. (550 aa)
	ADO72534.1	Conserved uncharacterized protein. (990 aa)
	ADO73463.1	Conserved uncharacterized protein. (621 aa)
	ADO73598.1	Uncharacterized protein. (1609 aa)
	ADO74271.1	Conserved uncharacterized protein. (266 aa)
	ADO74335.1	Conserved uncharacterized protein. (486 aa)
	ADO74908.1	Tetratricopeptide repeat protein. (3177 aa)
	ADO74918.1	Conserved uncharacterized protein. (1764 aa)
	ADO75282.1	Conserved uncharacterized protein. (258 aa)

Your Current Organism:

Stigmatella aurantiaca

NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADO67817.1	ADO67881.1	STAUR_0008	STAUR_0072	Conserved uncharacterized protein.	Tenascin-X.	0.774
ADO67817.1	ADO68572.1	STAUR_0008	STAUR_0768	Conserved uncharacterized protein.	SEC-C motif domain protein.	0.770
ADO67817.1	ADO70124.1	STAUR_0008	STAUR_2320	Conserved uncharacterized protein.	LysM domain protein, Peptidoglycan-binding protein.	0.771
ADO67817.1	ADO72331.1	STAUR_0008	STAUR_4551	Conserved uncharacterized protein.	Uncharacterized protein.	0.774
ADO67817.1	ADO72534.1	STAUR_0008	STAUR_4755	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.774
ADO67817.1	ADO73463.1	STAUR_0008	STAUR_5700	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.774
ADO67817.1	ADO73598.1	STAUR_0008	STAUR_5837	Conserved uncharacterized protein.	Uncharacterized protein.	0.766
ADO67817.1	ADO74271.1	STAUR_0008	STAUR_6514	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.771
ADO67817.1	ADO74335.1	STAUR_0008	STAUR_6578	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.771
ADO67817.1	ADO74908.1	STAUR_0008	STAUR_7152	Conserved uncharacterized protein.	Tetratricopeptide repeat protein.	0.774
ADO67817.1	ADO74918.1	STAUR_0008	STAUR_7162	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.774
ADO67817.1	ADO75282.1	STAUR_0008	STAUR_7527	Conserved uncharacterized protein.	Conserved uncharacterized protein.	0.772
ADO67881.1	ADO67817.1	STAUR_0072	STAUR_0008	Tenascin-X.	Conserved uncharacterized protein.	0.774
ADO67881.1	ADO68572.1	STAUR_0072	STAUR_0768	Tenascin-X.	SEC-C motif domain protein.	0.771
ADO67881.1	ADO70124.1	STAUR_0072	STAUR_2320	Tenascin-X.	LysM domain protein, Peptidoglycan-binding protein.	0.773
ADO67881.1	ADO72331.1	STAUR_0072	STAUR_4551	Tenascin-X.	Uncharacterized protein.	0.774
ADO67881.1	ADO72534.1	STAUR_0072	STAUR_4755	Tenascin-X.	Conserved uncharacterized protein.	0.776
ADO67881.1	ADO73463.1	STAUR_0072	STAUR_5700	Tenascin-X.	Conserved uncharacterized protein.	0.777
ADO67881.1	ADO73598.1	STAUR_0072	STAUR_5837	Tenascin-X.	Uncharacterized protein.	0.776
ADO67881.1	ADO74271.1	STAUR_0072	STAUR_6514	Tenascin-X.	Conserved uncharacterized protein.	0.771

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