STRINGSTRING
GAU_0173 GAU_0173 sdaB sdaB sdaA sdaA GAU_1242 GAU_1242 GAU_2506 GAU_2506 GAU_2693 GAU_2693
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAU_0173Putative threonine dehydratase; Protein synonym: threonine deaminase. (334 aa)
sdaBL-serine dehydratase beta chain; Protein synonym: L-SD; protein synonym: L-serine deaminase; protein synonym: SDH; Belongs to the iron-sulfur dependent L-serine dehydratase family. (222 aa)
sdaAL-serine dehydratase alpha chain; Protein synonym: L-SD; protein synonym: L-serine deaminase; protein synonym: SDH; Belongs to the iron-sulfur dependent L-serine dehydratase family. (294 aa)
GAU_1242Protein synonym: threonine deaminase. (330 aa)
GAU_2506Protein synonym: threonine deaminase. (325 aa)
GAU_2693Putative threonine dehydratase; Protein synonym: threonine deaminase. (325 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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