STRINGSTRING
ctaC ctaC ctaD ctaD ctaE ctaE GAU_0507 GAU_0507 ctaG ctaG GAU_0509 GAU_0509 GAU_0696 GAU_0696 GAU_0697 GAU_0697 GAU_2032 GAU_2032 GAU_2033 GAU_2033 GAU_2034 GAU_2034 GAU_2035 GAU_2035 GAU_2036 GAU_2036 GAU_2037 GAU_2037 GAU_2058 GAU_2058 GAU_2071 GAU_2071 GAU_2580 GAU_2580 ctaB ctaB GAU_2709 GAU_2709 GAU_2936 GAU_2936 GAU_3776 GAU_3776
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctaCCytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (429 aa)
ctaDCytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (626 aa)
ctaECytochrome c oxidase subunit III. (230 aa)
GAU_0507Hypothetical membrane protein. (114 aa)
ctaGPutative CtaG protein. (307 aa)
GAU_0509Hypothetical protein. (209 aa)
GAU_0696Putative menaquinol-cytochrome c reductase cytochrome b/c subunit. (611 aa)
GAU_0697Rieske iron-sulfur protein. (178 aa)
GAU_2032Hypothetical membrane protein. (443 aa)
GAU_2033Hypothetical protein. (266 aa)
GAU_2034Hypothetical membrane protein. (166 aa)
GAU_2035Hypothetical protein. (475 aa)
GAU_2036Putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1028 aa)
GAU_2037Cytochrome c3. (205 aa)
GAU_2058Hypothetical protein. (299 aa)
GAU_2071Hypothetical protein. (169 aa)
GAU_2580Cytochrome oxidase assembly family protein. (326 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (307 aa)
GAU_2709Hypothetical membrane protein. (241 aa)
GAU_2936Putative cytochrome c. (161 aa)
GAU_3776Putative cbb3 oxidase subunit IV. (65 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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