STRINGSTRING
GAU_0067 GAU_0067 GAU_0176 GAU_0176 GAU_0247 GAU_0247 GAU_2294 GAU_2294 GAU_3187 GAU_3187 GAU_3670 GAU_3670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAU_0067Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa)
GAU_0176Putative oxidoreductase. (243 aa)
GAU_0247Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
GAU_2294Putative oxidoreductase. (281 aa)
GAU_3187Oxidoreductase. (256 aa)
GAU_36703-hydroxybutyrate dehydrogenase; Protein synonym: BDH; protein synonym: D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (302 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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