STRINGSTRING
GAU_0479 GAU_0479 GAU_0520 GAU_0520 msbA msbA GAU_0783 GAU_0783 GAU_0784 GAU_0784 GAU_0785 GAU_0785 GAU_0787 GAU_0787 GAU_0792 GAU_0792 GAU_0794 GAU_0794 GAU_0931 GAU_0931 GAU_0932 GAU_0932 pfpI pfpI GAU_1730 GAU_1730 GAU_2174 GAU_2174 GAU_2377 GAU_2377 GAU_2582 GAU_2582 GAU_2812 GAU_2812 GAU_3012 GAU_3012 GAU_3135 GAU_3135 GAU_3242 GAU_3242 GAU_3745 GAU_3745 GAU_3751 GAU_3751
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAU_0479Putative serine hydrolase. (261 aa)
GAU_0520Hypothetical protein. (375 aa)
msbALipid A export ATP-binding/permease protein. (639 aa)
GAU_0783Long-chain fatty-acid-CoA ligase; Fragment. (231 aa)
GAU_0784Long-chain fatty-acid-CoA ligase; Fragment. (379 aa)
GAU_0785Hypothetical protein. (280 aa)
GAU_0787Hypothetical protein. (199 aa)
GAU_0792Hypothetical protein. (316 aa)
GAU_0794Hypothetical membrane protein. (81 aa)
GAU_0931Putative ABC transporter ATP-binding protein. (590 aa)
GAU_0932Hypothetical protein. (297 aa)
pfpIProtease I. (175 aa)
GAU_1730Putative S1B family peptidase. (474 aa)
GAU_2174Putative ABC transporter ATP-binding protein. (645 aa)
GAU_2377Putative S1 family peptidase. (507 aa)
GAU_2582Putative Lipid A export ATP-binding/permease protein. (586 aa)
GAU_2812Hypothetical protein. (701 aa)
GAU_3012Hypothetical protein. (467 aa)
GAU_3135Histone deacetylase family protein. (311 aa)
GAU_3242Hypothetical protein. (308 aa)
GAU_3745Putative ABC transporter ATP-binding/permease protein. (602 aa)
GAU_3751Hypothetical protein. (224 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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