STRINGSTRING
GAU_3642 GAU_3642 btuB btuB GAU_0591 GAU_0591 GAU_1025 GAU_1025 GAU_1055 GAU_1055 GAU_1071 GAU_1071 GAU_1118 GAU_1118 GAU_1225 GAU_1225 GAU_1287 GAU_1287 GAU_1464 GAU_1464 GAU_1691 GAU_1691 pal pal GAU_2293 GAU_2293 GAU_2336 GAU_2336 GAU_2404 GAU_2404 GAU_2470 GAU_2470 GAU_2635 GAU_2635 GAU_2673 GAU_2673 GAU_2677 GAU_2677 GAU_2753 GAU_2753 GAU_2940 GAU_2940 GAU_3034 GAU_3034 GAU_3035 GAU_3035 GAU_3036 GAU_3036 GAU_3199 GAU_3199 GAU_3732 GAU_3732 GAU_3804 GAU_3804 GAU_3808 GAU_3808
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAU_3642Hypothetical protein. (428 aa)
btuBPutative vitamin B12 transport protein BtuB. (650 aa)
GAU_0591TonB-dependent outer membrane transport protein. (705 aa)
GAU_1025Hypothetical protein. (985 aa)
GAU_1055Hypothetical protein. (531 aa)
GAU_1071Hypothetical protein. (261 aa)
GAU_1118Hypothetical protein. (268 aa)
GAU_1225TonB-dependent outer membrane transport protein. (660 aa)
GAU_1287Hypothetical protein. (510 aa)
GAU_1464Putative outer membrane protein. (1026 aa)
GAU_1691Hypothetical protein. (653 aa)
palPutative peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family. (185 aa)
GAU_2293Putative outer membrane protein. (233 aa)
GAU_2336Hypothetical protein. (706 aa)
GAU_2404Putative outer membrane protein. (1007 aa)
GAU_2470Putative outer membrane protein. (1032 aa)
GAU_2635Hypothetical protein. (215 aa)
GAU_2673TonB-dependent outer membrane transport protein. (728 aa)
GAU_2677TonB-dependent outer membrane transport protein. (895 aa)
GAU_2753Hypothetical protein. (338 aa)
GAU_2940Hypothetical protein. (793 aa)
GAU_3034Hypothetical protein. (273 aa)
GAU_3035Hypothetical protein. (278 aa)
GAU_3036Hypothetical protein. (272 aa)
GAU_3199Hypothetical protein. (346 aa)
GAU_3732Hypothetical protein. (457 aa)
GAU_3804Hypothetical protein. (252 aa)
GAU_3808Putative outer membrane protein. (1039 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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