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ftnA ftnA nrdB nrdB dps dps paaC paaC paaA paaA GAU_0102 GAU_0102 GAU_0101 GAU_0101 GAU_3746 GAU_3746 GAU_3517 GAU_3517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ftnAPutative ferritin; Iron-storage protein. (161 aa)
nrdBRibonucleoside-diphosphate reductase beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (371 aa)
dpsDNA protection during starvation protein; Belongs to the Dps family. (168 aa)
paaCPhenylacetic acid degradation protein. (250 aa)
paaAPhenylacetic acid degradation protein. (341 aa)
GAU_0102Hypothetical protein. (249 aa)
GAU_0101Hypothetical protein. (228 aa)
GAU_3746Putative fatty-acid desaturase. (322 aa)
GAU_3517DNA-binding stress protein; Belongs to the Dps family. (149 aa)
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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