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| | KZO59098.1 | Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa) |
| | A2U19_00045 | Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (211 aa) |
| | A2U19_00060 | Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (128 aa) |
| | KZO58387.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | KZO57638.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | KZO57639.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa) |
| | KZO57641.1 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa) |
| | KZO57648.1 | NgoFVII family restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (1105 aa) |
| | KZO57626.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (144 aa) |
| | KZO57637.1 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa) |
| | KZO57631.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (247 aa) |
| | KZO57633.1 | Invertase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa) |
| | A2U19_00235 | Damage-inducible protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa) |
| | KZO57621.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa) |
| | KZO57591.1 | Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | KZO57592.1 | Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | KZO57595.1 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa) |
| | KZO57611.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | KZO57614.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa) |
| | A2U19_00450 | Histidine kinase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | KZO57560.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa) |
| | KZO57562.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa) |
| | KZO57570.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa) |
| | KZO60595.1 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (702 aa) |
| | KZO60605.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa) |
| | KZO60615.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | KZO60544.1 | Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa) |
| | KZO60552.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | KZO60583.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa) |
| | KZO60569.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa) |
| | KZO60505.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1220 aa) |
| | KZO60541.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | KZO60521.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa) |
| | A2U19_01240 | ABC transporter permease; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa) |
| | KZO60528.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (209 aa) |
| | KZO60442.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | KZO60451.1 | DNA resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa) |
| | KZO60454.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (846 aa) |
| | KZO60457.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (193 aa) |
| | KZO60472.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (104 aa) |
| | KZO60474.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (151 aa) |
| | KZO60491.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa) |
| | KZO60494.1 | Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | KZO60495.1 | Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | KZO60496.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | KZO60497.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa) |
| | KZO60498.1 | Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | KZO60499.1 | Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa) |
| | KZO60391.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa) |
| | nrdR | Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. (151 aa) |
| | lexA | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (222 aa) |
| | KZO60399.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | KZO60402.1 | DNA repair ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa) |
| | recA | DNA recombination/repair protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (367 aa) |
| | KZO60409.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa) |
| | KZO60436.1 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. (899 aa) |
| | KZO60372.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa) |
| | A2U19_02040 | Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa) |
| | KZO60275.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (199 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (368 aa) |
| | KZO60336.1 | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (94 aa) |
| | priA | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (681 aa) |
| | uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (695 aa) |
| | whiA | DNA-binding protein WhiA; Involved in cell division and chromosome segregation. (327 aa) |
| | KZO60202.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa) |
| | KZO60203.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | KZO60221.1 | ATP-dependent nuclease subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (986 aa) |
| | KZO60222.1 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. (1140 aa) |
| | KZO60223.1 | DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa) |
| | KZO60259.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa) |
| | KZO60236.1 | RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa) |
| | KZO60241.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa) |
| | KZO60245.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (277 aa) |
| | KZO60261.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa) |
| | sigA | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (465 aa) |
| | KZO60141.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa) |
| | KZO60145.1 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (322 aa) |
| | KZO60147.1 | Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | KZO60153.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | KZO60160.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | KZO60161.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa) |
| | xerC | Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (316 aa) |
| | KZO60102.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa) |
| | KZO60100.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | KZO60012.1 | Transcriptional regulator ArgP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (298 aa) |
| | KZO60022.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (209 aa) |
| | KZO60023.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (295 aa) |
| | KZO60046.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | KZO60064.1 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa) |
| | KZO60065.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa) |
| | KZO60071.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (84 aa) |
| | KZO60072.1 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (823 aa) |
| | KZO59995.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (210 aa) |
| | argR | Arginine repressor; Regulates arginine biosynthesis genes. (171 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1022 aa) |
| | KZO59940.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (810 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (709 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (900 aa) |
| | KZO59975.1 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa) |
| | KZO59977.1 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa) |
| | KZO59992.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa) |
| | KZO59842.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | KZO59856.1 | RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa) |
| | KZO59888.1 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa) |
| | KZO59898.1 | Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology. (782 aa) |
| | KZO59907.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa) |
| | KZO59908.1 | Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | KZO59919.1 | Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa) |
| | KZO59787.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | KZO59794.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | KZO59692.1 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa) |
| | KZO59765.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa) |
| | KZO59707.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa) |
| | KZO59714.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (388 aa) |
| | KZO59730.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa) |
| | xerC-2 | Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (319 aa) |
| | KZO59593.1 | DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1188 aa) |
| | mutM | DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (303 aa) |
| | KZO59628.1 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (126 aa) |
| | KZO59631.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa) |
| | KZO59680.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa) |
| | KZO59573.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. (249 aa) |
| | KZO59483.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (363 aa) |
| | KZO59491.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa) |
| | KZO59507.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa) |
| | KZO59555.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa) |
| | KZO59384.1 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa) |
| | KZO59453.1 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa) |
| | KZO59456.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa) |
| | KZO59460.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa) |
| | greA | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (165 aa) |
| | KZO59425.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (131 aa) |
| | KZO59428.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (77 aa) |
| | KZO59434.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | KZO59221.1 | RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (314 aa) |
| | whiB | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (92 aa) |
| | KZO59246.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa) |
| | KZO59257.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | KZO59325.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | KZO59265.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa) |
| | KZO59280.1 | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa) |
| | KZO59302.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | KZO59318.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa) |
| | KZO59101.1 | DNA integrity scanning protein DisA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DisA family. (352 aa) |
| | whiB-2 | GntR family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (91 aa) |
| | KZO59122.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa) |
| | KZO59134.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa) |
| | KZO59154.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa) |
| | KZO59165.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa) |
| | A2U19_08805 | Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (491 aa) |
| | KZO59049.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa) |
| | KZO58900.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa) |
| | KZO58902.1 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (999 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (263 aa) |
| | KZO58925.1 | Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa) |
| | KZO58926.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (329 aa) |
| | whiB-3 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (125 aa) |
| | KZO58949.1 | DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa) |
| | KZO58951.1 | Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (145 aa) |
| | KZO58960.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa) |
| | KZO58978.1 | Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (268 aa) |
| | KZO59000.1 | Transcriptional regulator; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (111 aa) |
| | KZO59001.1 | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. (892 aa) |
| | KZO59008.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | KZO59016.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (199 aa) |
| | A2U19_09770 | Thioesterase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | KZO59044.1 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa) |
| | KZO58849.1 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa) |
| | KZO58856.1 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa) |
| | KZO58886.1 | Invertase; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa) |
| | KZO58871.1 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa) |
| | KZO58879.1 | Heavy metal-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa) |
| | KZO58766.1 | RNA polymerase sigma factor SigE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (206 aa) |
| | KZO58807.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa) |
| | KZO58776.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | nucS | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (226 aa) |
| | KZO58817.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa) |
| | KZO58610.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (842 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (705 aa) |
| | recF | DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (410 aa) |
| | KZO58627.1 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (391 aa) |
| | dnaA | Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (501 aa) |
| | KZO58636.1 | Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (390 aa) |
| | KZO58738.1 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa) |
| | KZO58656.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (199 aa) |
| | KZO58675.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa) |
| | KZO58678.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | KZO58696.1 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa) |
| | KZO58706.1 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | KZO58723.1 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa) |
| | KZO58729.1 | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa) |
| | KZO58731.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (607 aa) |
| | KZO58510.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa) |
| | KZO58515.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | KZO58531.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa) |
| | KZO58580.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa) |
| | KZO58538.1 | Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa) |
| | A2U19_11860 | Transposase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa) |
| | KZO58405.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (154 aa) |
| | KZO58406.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa) |
| | KZO58408.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa) |
| | KZO58485.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa) |
| | A2U19_11900 | Transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa) |
| | KZO58412.1 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa) |
| | KZO58424.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa) |
| | KZO58492.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa) |
| | KZO58452.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa) |
| | KZO58495.1 | Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | A2U19_12365 | Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (392 aa) |
| | A2U19_12460 | Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa) |
| | KZO58157.1 | Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | KZO58168.1 | Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1356 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (344 aa) |
| | KZO58209.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1319 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1168 aa) |
| | nusG | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. (300 aa) |
| | KZO58281.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa) |
| | KZO58298.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa) |
| | KZO58306.1 | BadM/Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa) |
| | KZO58309.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa) |
| | KZO58374.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa) |
| | KZO58313.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (76 aa) |
| | KZO58321.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa) |
| | KZO58325.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa) |
| | whiB-4 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (92 aa) |
| | KZO58337.1 | Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa) |
| | KZO58091.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | KZO58096.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (889 aa) |
| | KZO58114.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (197 aa) |
| | KZO58141.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa) |
| | A2U19_14000 | Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (443 aa) |
| | KZO57868.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa) |
| | KZO57873.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (934 aa) |
| | KZO57875.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (701 aa) |
| | KZO57881.1 | IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa) |
| | KZO57906.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | KZO57914.1 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa) |
| | KZO57916.1 | Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | hrcA | Heat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (346 aa) |
| | KZO57935.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (675 aa) |
| | KZO58065.1 | PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa) |
| | KZO58074.1 | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (821 aa) |
| | KZO57989.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa) |
| | KZO57999.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa) |
| | mraZ | Division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. (158 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (486 aa) |
| | KZO58032.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa) |
| | KZO58033.1 | RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa) |
| | KZO58086.1 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | KZO57848.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa) |
| | ku | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (365 aa) |
| | cynS | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (149 aa) |
| | KZO57660.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa) |
| | KZO57806.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (695 aa) |
| | KZO57668.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1108 aa) |
| | KZO57669.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1093 aa) |
| | KZO57672.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | whiB-5 | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (82 aa) |
| | KZO57678.1 | RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (225 aa) |
| | KZO57680.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (267 aa) |
| | KZO57814.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | whiB-6 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (103 aa) |
| | KZO57728.1 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa) |
| | KZO57733.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (303 aa) |
| | KZO57740.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa) |
| | KZO57743.1 | DtxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | KZO57830.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa) |
| | KZO57749.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa) |
| | KZO57757.1 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa) |
| | KZO57795.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa) |
| | KZO57843.1 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa) |
