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| | KMO75412.1 | Polyketide cyclase / dehydrase and lipid transport. (153 aa) |
| | blc_2 | Outer membrane lipoprotein Blc precursor. (615 aa) |
| | blc_1 | Outer membrane lipoprotein Blc precursor. (321 aa) |
| | KMO66877.1 | Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. (163 aa) |
| | clpC | Negative regulator of genetic competence ClpC/MecB. (185 aa) |
| | tcrX_3 | Putative transcriptional regulatory protein TcrX. (236 aa) |
| | gpx2 | Hydroperoxy fatty acid reductase gpx2; Belongs to the glutathione peroxidase family. (162 aa) |
| | KMO67868.1 | Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. (209 aa) |
| | KMO67799.1 | Pyridoxamine 5'-phosphate oxidase. (183 aa) |
| | KMO67775.1 | Polyketide cyclase / dehydrase and lipid transport. (150 aa) |
| | KMO67683.1 | 18 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family. (149 aa) |
| | ykoV | Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (308 aa) |
| | KMO67656.1 | Putative DNA ligase-like protein. (753 aa) |
| | fpg2 | Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family. (287 aa) |
| | uvrD1 | ATP-dependent DNA helicase UvrD1. (770 aa) |
| | KMO67565.1 | Hypothetical protein. (198 aa) |
| | sigJ_2 | ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family. (294 aa) |
| | mfd | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1210 aa) |
| | mazG | Nucleoside triphosphate pyrophosphohydrolase. (337 aa) |
| | efeO | Iron uptake system component EfeO precursor. (383 aa) |
| | KMO67486.1 | Universal stress protein family protein. (295 aa) |
| | mnmC_2 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC. (312 aa) |
| | KMO67377.1 | Hypothetical protein. (125 aa) |
| | ychF | Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (360 aa) |
| | cobB_3 | NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. (235 aa) |
| | yjjL | L-galactonate transporter. (450 aa) |
| | KMO67285.1 | HhH-GPD superfamily base excision DNA repair protein. (194 aa) |
| | mqnE | Aminodeoxyfutalosine synthase. (859 aa) |
| | nudF_2 | ADP-ribose pyrophosphatase. (178 aa) |
| | yidH | Inner membrane protein YidH. (117 aa) |
| | tag | DNA-3-methyladenine glycosylase 1. (200 aa) |
| | deaD_2 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (566 aa) |
| | irtA | Iron import ATP-binding/permease protein IrtA. (234 aa) |
| | KMO67180.1 | Uracil DNA glycosylase superfamily protein. (277 aa) |
| | KMO67174.1 | Hypothetical protein. (163 aa) |
| | KMO67158.1 | Hypothetical protein. (176 aa) |
| | KMO67157.1 | Hypothetical protein. (186 aa) |
| | KMO67155.1 | Exonuclease subunit SbcD. (382 aa) |
| | KMO67154.1 | Chromosome segregation protein. (884 aa) |
| | tcrX_2 | Putative transcriptional regulatory protein TcrX. (252 aa) |
| | cysNC_2 | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (615 aa) |
| | KMO67113.1 | Hypothetical protein. (316 aa) |
| | ogt_2 | Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (167 aa) |
| | alkA | DNA-3-methyladenine glycosylase 2. (502 aa) |
| | KMO68772.1 | Hypothetical protein; Probable ATP-dependent helicase DinG homolog. (663 aa) |
| | nei1_3 | Endonuclease 8 1; Belongs to the FPG family. (266 aa) |
| | KMO68513.1 | Putative pyridoxine/pyridoxamine 5'-phosphate oxidase. (147 aa) |
| | uvrB | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (730 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (915 aa) |
| | KMO69718.1 | Hypothetical protein. (193 aa) |
| | tetA | Tetracycline resistance protein, class C. (422 aa) |
| | ykoU_2 | Putative ATP-dependent DNA ligase YkoU. (316 aa) |
| | ykuT_3 | Putative MscS family protein YkuT. (325 aa) |
| | KMO70845.1 | Pyridoxamine 5'-phosphate oxidase. (144 aa) |
| | KMO70829.1 | Universal stress protein. (275 aa) |
| | KMO70828.1 | Universal stress protein. (293 aa) |
| | tgs1_2 | Putative diacylglycerol O-acyltransferase tgs1; Belongs to the long-chain O-acyltransferase family. (461 aa) |
| | KMO70823.1 | Universal stress protein. (281 aa) |
| | KMO70822.1 | Universal stress protein. (253 aa) |
| | KMO70820.1 | Putative NAD(P)H nitroreductase. (330 aa) |
| | KMO70819.1 | Universal stress protein. (304 aa) |
| | KMO70763.1 | Putative DNA ligase-like protein. (234 aa) |
| | KMO70742.1 | Universal stress protein family protein. (155 aa) |
| | KMO70722.1 | Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family. (472 aa) |
| | espG1_2 | ESX-1 secretion-associated protein EspG1. (120 aa) |
| | KMO70570.1 | Hypothetical protein; Belongs to the UPF0310 family. (152 aa) |
| | fhaB | FHA domain-containing protein FhaB. (154 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (386 aa) |
| | KMO70517.1 | Hypothetical protein. (243 aa) |
| | trxB_4 | Thioredoxin reductase. (331 aa) |
| | phr | Deoxyribodipyrimidine photo-lyase. (406 aa) |
| | uvrA_2 | UvrABC system protein A. (844 aa) |
| | KMO70438.1 | Pyridoxamine 5'-phosphate oxidase. (142 aa) |
| | KMO70417.1 | Universal stress protein family protein. (283 aa) |
| | hslR | Heat shock protein 15. (125 aa) |
| | KMO70378.1 | Hypothetical protein. (366 aa) |
| | KMO70370.1 | Putative NAD(P)H nitroreductase. (277 aa) |
| | hmp_5 | Flavohemoprotein. (581 aa) |
| | nei1_2 | Endonuclease 8 1. (262 aa) |
| | KMO70275.1 | Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family. (485 aa) |
| | sigH_3 | ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa) |
| | KMO70237.1 | Pyridoxamine 5'-phosphate oxidase. (165 aa) |
| | msrA | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (169 aa) |
| | msrB_2 | Peptide methionine sulfoxide reductase MsrB. (159 aa) |
| | KMO70194.1 | Hypothetical protein. (303 aa) |
| | dinB_4 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (404 aa) |
| | sodN | Superoxide dismutase [Ni] precursor. (140 aa) |
| | gpmA_2 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. (232 aa) |
| | KMO70114.1 | Hypothetical protein. (630 aa) |
| | KMO70109.1 | Pyridoxamine 5'-phosphate oxidase. (144 aa) |
| | pspA_4 | Phosphoserine phosphatase 1. (202 aa) |
| | KMO70035.1 | Mycobacterium 19 kDa lipoprotein antigen. (153 aa) |
| | KMO70009.1 | Putative DNA ligase-like protein. (351 aa) |
| | KMO70007.1 | Putative nucleotidyltransferase substrate binding domain protein. (345 aa) |
| | KMO70001.1 | Putative DNA ligase-like protein. (343 aa) |
| | ykoU_1 | Putative ATP-dependent DNA ligase YkoU. (349 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (203 aa) |
| | dnaQ_2 | DNA polymerase III subunit epsilon. (333 aa) |
| | katA | Catalase. (482 aa) |
| | pknH_5 | Serine/threonine-protein kinase PknH. (1375 aa) |
| | KMO69915.1 | EcoKI restriction-modification system protein HsdS. (407 aa) |
| | hsdR | Type I restriction enzyme EcoR124II R protein. (1159 aa) |
| | KMO69910.1 | 6-O-methylguanine DNA methyltransferase, DNA binding domain. (692 aa) |
| | KMO71118.1 | Hypothetical protein. (74 aa) |
| | dinB_3 | DNA polymerase IV. (525 aa) |
| | KMO71501.1 | Hypothetical protein. (233 aa) |
| | devR_2 | Transcriptional regulatory protein DevR (DosR). (216 aa) |
| | tgs1_1 | Putative diacylglycerol O-acyltransferase tgs1. (420 aa) |
| | KMO71425.1 | Universal stress protein. (290 aa) |
| | KMO71423.1 | Universal stress protein. (276 aa) |
| | KMO71411.1 | Hypothetical protein. (375 aa) |
| | hrp1 | Hypoxic response protein 1. (144 aa) |
| | KMO71408.1 | Universal stress protein. (279 aa) |
| | hspX | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. (111 aa) |
| | KMO71623.1 | Putative peroxiredoxin. (153 aa) |
| | ampH_1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH precursor. (274 aa) |
| | KMO71606.1 | Putative S-adenosylmethionine-dependent methyltransferase. (357 aa) |
| | KMO71589.1 | Hypothetical protein. (276 aa) |
| | recD_2 | RecBCD enzyme subunit RecD; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holo [...] (558 aa) |
| | recB | RecBCD enzyme subunit RecB; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holo [...] (1101 aa) |
| | recC_2 | RecBCD enzyme subunit RecC. (748 aa) |
| | recC_1 | RecBCD enzyme subunit RecC. (387 aa) |
| | end | Putative endonuclease 4. (250 aa) |
| | KMO71723.1 | Hypothetical protein. (178 aa) |
| | KMO71722.1 | Hypothetical protein. (175 aa) |
| | ylaC | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa) |
| | deaD_1 | ATP-dependent RNA helicase DeaD. (1509 aa) |
| | nei1_1 | Endonuclease 8 1; Belongs to the FPG family. (253 aa) |
| | sigJ_1 | ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family. (302 aa) |
| | KMO71982.1 | Universal stress protein. (285 aa) |
| | exoA | Exodeoxyribonuclease. (270 aa) |
| | hmp_4 | Flavohemoprotein; Belongs to the globin family. (407 aa) |
| | dnaE2 | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1098 aa) |
| | ohrB | Organic hydroperoxide resistance protein OhrB. (140 aa) |
| | pdg | Ultraviolet N-glycosylase/AP lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (250 aa) |
| | gloB_2 | Hydroxyacylglutathione hydrolase. (229 aa) |
| | uvrA_1 | UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (988 aa) |
| | pat_1 | Phosphinothricin N-acetyltransferase. (163 aa) |
| | KMO72371.1 | Hypothetical protein. (388 aa) |
| | KMO72370.1 | Mycobacterium 19 kDa lipoprotein antigen. (164 aa) |
| | KMO72325.1 | Putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. (203 aa) |
| | KMO72493.1 | Pyridoxamine 5'-phosphate oxidase. (180 aa) |
| | sigH_2 | ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily. (253 aa) |
| | rshA | Anti-sigma factor RshA. (104 aa) |
| | scoB | Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B. (214 aa) |
| | ogt_1 | Methylated-DNA--protein-cysteine methyltransferase. (98 aa) |
| | pcrA | ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. (1087 aa) |
| | mdtG | Multidrug resistance protein MdtG. (449 aa) |
| | KMO72887.1 | Pyridoxamine 5'-phosphate oxidase. (177 aa) |
| | KMO74296.1 | Putative NAD(P)H nitroreductase. (273 aa) |
| | KMO74295.1 | Putative NAD(P)H nitroreductase. (58 aa) |
| | KMO74514.1 | Putative DNA ligase-like protein. (251 aa) |
| | cbpA | Curved DNA-binding protein. (315 aa) |
| | clpB_2 | Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (874 aa) |
| | apa | Alanine and proline-rich secreted protein Apa precursor. (174 aa) |
| | KMO75455.1 | Hypothetical protein. (210 aa) |
| | lon_3 | Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (777 aa) |
| | KMO75377.1 | Hypothetical protein; Belongs to the UPF0246 family. (248 aa) |
| | tpx | Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (165 aa) |
| | KMO75331.1 | Pyridoxamine 5'-phosphate oxidase. (214 aa) |
| | KMO75307.1 | Pyridoxamine 5'-phosphate oxidase. (148 aa) |
| | KMO75284.1 | Pyridoxamine 5'-phosphate oxidase. (141 aa) |
| | viuB_2 | Vibriobactin utilization protein ViuB. (270 aa) |
| | KMO75217.1 | Hypothetical protein. (87 aa) |
| | KMO75174.1 | Pyridoxamine 5'-phosphate oxidase. (127 aa) |
| | splB | Spore photoproduct lyase. (361 aa) |
| | KMO75141.1 | Putative nucleotidyltransferase substrate binding domain protein. (616 aa) |
| | KMO75099.1 | Phosphatidylinositol 3- and 4-kinase. (269 aa) |
| | KMO75082.1 | Universal stress protein. (136 aa) |
| | KMO75037.1 | Polyketide cyclase / dehydrase and lipid transport. (145 aa) |
| | polC | DNA polymerase III PolC-type. (617 aa) |
| | KMO75560.1 | Hypothetical protein. (167 aa) |
| | KMO75866.1 | Hypothetical protein. (206 aa) |
| | KMO75844.1 | Alkyl hydroperoxide reductase subunit C. (221 aa) |
| | yedK | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. (253 aa) |
| | KMO76279.1 | Putative diacylglycerol O-acyltransferase. (140 aa) |
| | KMO76960.1 | Putative nucleotide-binding protein; Belongs to the UPF0234 family. (163 aa) |
| | icl | Isocitrate lyase. (430 aa) |
| | KMO76793.1 | Anaerobic benzoate catabolism transcriptional regulator. (477 aa) |
| | ykgB_2 | Inner membrane protein YkgB. (156 aa) |
| | KMO76774.1 | Ski2-like helicase. (846 aa) |
| | sodC | Superoxide dismutase [Cu-Zn] precursor; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (236 aa) |
| | xthA | Exodeoxyribonuclease III. (272 aa) |
| | KMO76685.1 | Hypothetical protein. (669 aa) |
| | rppH_2 | RNA pyrophosphohydrolase; Belongs to the Nudix hydrolase family. (163 aa) |
| | KMO76645.1 | Hypothetical protein. (121 aa) |
| | KMO76644.1 | Hypothetical protein. (327 aa) |
| | clpB_1 | Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (848 aa) |
| | dnaJ_2 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (394 aa) |
| | KMO77119.1 | ATP-dependent DNA ligase. (111 aa) |
| | KMO77486.1 | Pyridoxamine 5'-phosphate oxidase. (175 aa) |
| | KMO78717.1 | Universal stress protein. (294 aa) |
| | KMO78693.1 | Hypothetical protein. (45 aa) |
| | cstA | Carbon starvation protein A. (768 aa) |
| | lig | Putative DNA ligase-like protein; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (512 aa) |
| | KMO78681.1 | Hypothetical protein; RecF/RecN/SMC N terminal domain. (388 aa) |
| | dinB_2 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (357 aa) |
| | ligA | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (702 aa) |
| | mutT4_1 | Putative mutator protein MutT4; Belongs to the Nudix hydrolase family. (299 aa) |
| | ung | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (225 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (742 aa) |
| | fpg1 | Formamidopyrimidine-DNA glycosylase 1; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (283 aa) |
| | KMO78516.1 | 6-O-methylguanine DNA methyltransferase, DNA binding domain. (87 aa) |
| | viuB_1 | Vibriobactin utilization protein ViuB. (280 aa) |
| | phrA | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. (447 aa) |
| | KMO78366.1 | Hypothetical protein. (402 aa) |
| | clgR | Transcriptional regulator ClgR. (106 aa) |
| | recA | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (347 aa) |
| | lexA | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (233 aa) |
| | KMO78272.1 | Hypothetical protein. (123 aa) |
| | msrB_1 | Peptide methionine sulfoxide reductase MsrB. (136 aa) |
| | clpC1_2 | ATP-dependent Clp protease ATP-binding subunit ClpC1. (240 aa) |
| | sigF_2 | RNA polymerase sigma factor SigF; Belongs to the sigma-70 factor family. (240 aa) |
| | KMO78219.1 | Putative NAD(P)H nitroreductase. (337 aa) |
| | devR_1 | Transcriptional regulatory protein DevR (DosR). (216 aa) |
| | KMO78217.1 | Universal stress protein. (274 aa) |
| | acg_1 | Putative NAD(P)H nitroreductase acg. (330 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (190 aa) |
| | ruvA | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (195 aa) |
| | ruvB_1 | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (356 aa) |
| | KMO78156.1 | Radical SAM superfamily protein. (304 aa) |
| | sigH_1 | ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa) |
| | uvrC | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (672 aa) |
| | dinB_1 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (452 aa) |
| | bcp_3 | Putative peroxiredoxin bcp. (154 aa) |
| | KMO79867.1 | Alkyl hydroperoxide reductase subunit C. (222 aa) |
| | KMO80705.1 | Hypothetical protein. (77 aa) |
| | fdxA_1 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (117 aa) |
| | cnrH | RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa) |
| | KMO82116.1 | Restriction endonuclease. (177 aa) |
| | sigF_1 | RNA polymerase sigma factor SigF; Belongs to the sigma-70 factor family. (241 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (592 aa) |
| | nudF_1 | ADP-ribose pyrophosphatase. (228 aa) |
| | KMO82309.1 | Deoxyribodipyrimidine photo-lyase-related protein. (493 aa) |
| | katG2 | Catalase-peroxidase 2; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (748 aa) |
| | KMO82273.1 | Uracil DNA glycosylase superfamily protein. (216 aa) |
| | KMO82567.1 | Pyridoxamine 5'-phosphate oxidase. (140 aa) |
| | rpoE_2 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (211 aa) |
| | ykgB_1 | Inner membrane protein YkgB. (157 aa) |
| | KMO82518.1 | Putative DNA ligase-like protein. (290 aa) |
| | KMO82515.1 | Putative DNA ligase-like protein. (362 aa) |
| | KMO82500.1 | Uracil DNA glycosylase superfamily protein. (209 aa) |
| | bspRIM | Modification methylase BspRI; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (330 aa) |
| | dnaQ_1 | DNA polymerase III subunit epsilon. (195 aa) |
| | rpoE_1 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa) |
| | KMO82918.1 | Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family. (461 aa) |
| | garA_1 | Glycogen accumulation regulator GarA. (205 aa) |
| | KMO82883.1 | Hypothetical protein. (226 aa) |
| | KMO82847.1 | Reverse transcriptase (RNA-dependent DNA polymerase). (442 aa) |
| | rhlE_1 | ATP-dependent RNA helicase RhlE. (435 aa) |
| | KMO82808.1 | Hypothetical protein. (374 aa) |
| | recD2_1 | ATP-dependent RecD-like DNA helicase. (781 aa) |
| | KMO82789.1 | Pyridoxamine 5'-phosphate oxidase. (138 aa) |
| | KMO83029.1 | Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family. (466 aa) |
| | cysNC_1 | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. (619 aa) |
| | KMO83207.1 | Putative DNA ligase-like protein. (412 aa) |
| | srmB | ATP-dependent RNA helicase SrmB. (781 aa) |
| | KMO83538.1 | 26 kDa periplasmic immunogenic protein precursor. (245 aa) |
| | lsr2 | Nucleoid-associated protein Lsr2. (113 aa) |
| | mutY | A/G-specific adenine glycosylase. (297 aa) |
| | disA | DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process. (372 aa) |
| | radA | Hypothetical protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (438 aa) |
| | KMO83506.1 | Hypothetical protein. (196 aa) |
| | carD | RNA polymerase-binding transcription factor CarD. (162 aa) |
| | srpA | Catalase-related peroxidase precursor; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (358 aa) |
| | yfmO | Multidrug efflux protein YfmO. (403 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (278 aa) |
| | dnaJ_1 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (381 aa) |
| | dhbE | 2,3-dihydroxybenzoate-AMP ligase. (548 aa) |
| | comEA | ComE operon protein 1. (274 aa) |
| | bedA_1 | Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit. (412 aa) |
| | korA | 2-oxoglutarate oxidoreductase subunit KorA. (648 aa) |
| | KMO66886.1 | Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family. (472 aa) |
